Pre_GI Gene

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Host: NC_011312 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011312:3060371 Aliivibrio salmonicida LFI1238 chromosome chromosome 1, complete

Host Lineage: Aliivibrio salmonicida; Aliivibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: The fish pathogen Aliivibrio salmonicida, formerly Vibrio salmonicida, a halophilic and psychrophilic bacterium, is the causative agent of Hitra disease, also called cold water vibriosis, in Atlantic salmon and sea farmed rainbow trout in marine aquaculture. This disease, a generalized infection of the blood, occurs primarily in late autumn, winter, or early spring when water temperatures are below 15 degrees C. The Gram-negative bacterium causes tissue degradation, hemolysis and sepsis in vivo.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
306037130616961326transposaseQuickGO ontologyBLASTP
30618103062151342hypothetical proteinBLASTP
306216230638651704sodiumsolute symporterQuickGO ontologyBLASTP
306396030674063447membrane associated response regulator histidine kinaseQuickGO ontologyBLASTP
3067539306872011823-phenylpropionic acid transporterQuickGO ontologyBLASTP
306889030707221833nucleotidyltransferasesQuickGO ontologyBLASTP
30707243071356633DNA polymerase III subunit epsilonQuickGO ontologyBLASTP
307156230735111950acetyl-CoA synthetaseQuickGO ontologyBLASTP
307397030744194503-dehydroquinate dehydrataseQuickGO ontologyBLASTP
30744503074905456acetyl-CoA carboxylase biotin carboxyl carrier protein subunitQuickGO ontologyBLASTP
307491830762611344biotin carboxylase acetyl-CoA carboxylase subunit AQuickGO ontologyBLASTP
3076378307726288550S ribosomal protein L11 methyltransferaseQuickGO ontologyBLASTP
30774583078426969tRNA-dihydrouridine synthase BQuickGO ontologyBLASTP
30784493078745297DNA-binding protein FisQuickGO ontologyBLASTP
30788853079229345hypothetical protein
30792783079697420transcriptional regulatorQuickGO ontologyBLASTP
307998230815741593bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferaseIMP cyclohydrolaseQuickGO ontologyBLASTP