Pre_GI Gene

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Host: NC_011001 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011001:854713 Burkholderia cenocepacia J2315 chromosome 2, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain is the index strain for transmission among CF patients in the UK. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
854713855174462hypothetical proteinBLASTP
8552828566371356polyD---3-hydroxybutyrate depolymeraseQuickGO ontologyBLASTP
856869857588720glutathione-S-tranferase family proteinQuickGO ontologyBLASTP
8578308590861257putative cNMP-binding domain-containing proteinQuickGO ontologyBLASTP
859100859864765chemotaxis protein PomAQuickGO ontologyBLASTP
859935860606672OmpA family proteinQuickGO ontologyBLASTP
8607788626401863putative methyl-accepting chemotaxis proteinQuickGO ontologyBLASTP
8628558657912937putative helicaseQuickGO ontologyBLASTP
866472866897426hypothetical proteinBLASTP
8670988683451248putative prolidaseQuickGO ontologyBLASTP
8683528696681317major facilitator superfamily proteinQuickGO ontologyBLASTP
869801870748948LysR family regulatory proteinQuickGO ontologyBLASTP
870747871340594hypothetical proteinBLASTP
871648872019372hypothetical proteinBLASTP
8726668741081443outer membrane efflux proteinQuickGO ontologyBLASTP
8741278757011575major facilitator superfamily proteinQuickGO ontologyBLASTP
8757158768091095efflux system transport proteinQuickGO ontologyBLASTP
876874877305432MarR family regulatory proteinQuickGO ontologyBLASTP
877415878335921LysR family regulatory proteinQuickGO ontologyBLASTP
878392878856465MarR family regulatory proteinQuickGO ontologyBLASTP