Pre_GI Gene

Some Help

Host: NC_011000 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011000:183928 Burkholderia cenocepacia J2315 chromosome 1, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain is the index strain for transmission among CF patients in the UK. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
183928184539612putative RlpA-like lipoproteinQuickGO ontologyBLASTP
184618185505888putative methylaseQuickGO ontologyBLASTP
185552185980429hypothetical proteinBLASTP
186107186691585phosphoheptose isomeraseQuickGO ontologyBLASTP
186688187509822putative phospholipid-binding lipoproteinQuickGO ontologyBLASTP
187506187868363putative cytochrome c-551QuickGO ontologyBLASTP
18793518801076tRNA-AlaQuickGO ontologyBLASTP
188900189877978putative plasmid replication-associated proteinQuickGO ontologyBLASTP
190294191130837putative transposaseQuickGO ontologyBLASTP
191130191654525putative transposaseQuickGO ontologyBLASTP
191700191987288
192105192797693hypothetical proteinBLASTP
192918193169252hypothetical proteinBLASTP
193147193539393putative plasmid conjugal transfer proteinQuickGO ontologyBLASTP
193882194244363conjugal transfer relaxosome component TraJQuickGO ontologyBLASTP
194371195144774conjugal transfer protein TrbJQuickGO ontologyBLASTP
195154195345192hypothetical protein
1953651967921428putative plasmid conjugal transfer proteinQuickGO ontologyBLASTP
196857197147291hypothetical proteinBLASTP
197138197497360hypothetical proteinBLASTP
197494197796303putative plasmid conjugal transfer proteinQuickGO ontologyBLASTP
198105198917813putative DNA methyltransferaseQuickGO ontologyBLASTP
1989002015332634hypothetical proteinBLASTP
201536202231696hypothetical protein
202239202880642hypothetical proteinBLASTP
2032112043381128putative plasmid recombinaseQuickGO ontologyBLASTP
2045672059641398putative glucarate dehydrataseQuickGO ontologyBLASTP
2060272073671341putative glucarate transporterQuickGO ontologyBLASTP
207582208505924LysR family regulatory proteinQuickGO ontologyBLASTP
208597209328732putative glutathione S-transferaseQuickGO ontologyBLASTP
209455210087633hypothetical proteinBLASTP
2101032114401338putative dioxygenaseQuickGO ontologyBLASTP
2114542126201167putative ABC transporter permeaseQuickGO ontologyBLASTP
2126292137831155putative ABC transporter permeaseQuickGO ontologyBLASTP