Pre_GI Gene

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Host: NC_010725 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010725:4035397 Methylobacterium populi BJ001, complete genome

Host Lineage: Methylobacterium populi; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This species was isolated from tissue cultures of Populus, the Poplar tree. Colonies are pink to red, and the red pigment is water insoluble. Species of the genus Methylobacterium are strictly aerobic, facultatively methylotrophic, Gram-negative, rod-shaped bacteria that are able to grow on one-carbon compounds (e.g. methanol or methylamine), as well as on a variety of C2, C3 and C4 substrates. Only the type species, Methylobacterium organophilum, has been shown to use methane as the sole source of carbon and energy. Members of the genus are distributed in a wide variety of natural and man-made environments, including soil, air, dust, fresh- and marine water and sediments, water supplies, bathrooms, air-conditioning systems and masonry, and some are opportunistic human pathogens.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
403539740366171221putative PASPAC sensor proteinQuickGO ontologyBLASTP
40366744037431758Transposase and inactivated derivatives-like proteinQuickGO ontologyBLASTP
403775140398772127integral membrane sensor hybrid histidine kinaseQuickGO ontologyBLASTP
404009040425132424multi-sensor hybrid histidine kinaseQuickGO ontologyBLASTP
40425404042860321putative DNA-binding proteinQuickGO ontologyBLASTP
40429514043463513protein of unknown function DUF892QuickGO ontologyBLASTP
40437414043971231hypothetical protein
40445444045166623BLASTP
404562440477622139TonB-dependent siderophore receptorQuickGO ontologyBLASTP
40480634048194132BLASTP
40495644050094531hypothetical proteinBLASTP
40501064051071966hypothetical proteinBLASTP
40510494051864816ABC transporter relatedQuickGO ontologyBLASTP
405186140529071047transport system permease proteinQuickGO ontologyBLASTP
40529044053749846periplasmic binding proteinQuickGO ontologyBLASTP
405375740557241968TonB-dependent receptor plugQuickGO ontologyBLASTP
405656440587892226TonB-dependent siderophore receptorQuickGO ontologyBLASTP
405881640603811566extracellular solute-binding protein family 5QuickGO ontologyBLASTP
40603784061316939binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
40613134062149837binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
406214640635341389ABC transporter relatedQuickGO ontologyBLASTP
40637094064278570
40645664065162597Glutathione S-transferase domainQuickGO ontologyBLASTP
40652804065657378transcriptional regulator HxlR familyQuickGO ontologyBLASTP
40658754066150276transposase IS3IS911 family proteinQuickGO ontologyBLASTP
40661894067058870Integrase catalytic regionQuickGO ontologyBLASTP
40673814068019639transcriptional regulator TetR familyQuickGO ontologyBLASTP
40682314068863633Carboxymuconolactone decarboxylaseQuickGO ontologyBLASTP
40688604069822963superoxide dismutase sodC Cu-Zn familyQuickGO ontologyBLASTP
40698914070502612Glutathione S-transferase domainQuickGO ontologyBLASTP
40705174070723207hypothetical protein
40708304071597768hypothetical proteinBLASTP
407181740732531437transposase IS4 family proteinQuickGO ontologyBLASTP
40735264073996471hypothetical protein
40740504074580531hypothetical proteinBLASTP
407477440761921419integral membrane sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
40761894076851663two component transcriptional regulator LuxR familyQuickGO ontologyBLASTP
40771204077515396hypothetical proteinBLASTP
40775524077773222hypothetical protein
40779334078169237hypothetical protein
40782014078938738transcriptional regulator CrpFnr familyQuickGO ontologyBLASTP
40791204079311192BLASTP
40795934079832240transcriptional regulator XRE familyQuickGO ontologyBLASTP
40805414081149609hypothetical proteinBLASTP
40812214082054834hypothetical proteinBLASTP
408205140841982148AAA ATPase central domain proteinQuickGO ontologyBLASTP
40841864084497312hypothetical proteinBLASTP
40849444085072129
40851364085411276transposase IS3IS911 family proteinQuickGO ontologyBLASTP
40854764085979504transposase IS4 family proteinQuickGO ontologyBLASTP
408618740880671881Resolvase domainQuickGO ontologyBLASTP
408818240903052124Resolvase domainQuickGO ontologyBLASTP
40912194091911693hypothetical proteinBLASTP
40918954092521627hypothetical proteinBLASTP
40931064093848743BLASTP
40944764095144669hypothetical protein
40957314096085355BLASTP
40962704096875606protein of unknown function DUF433QuickGO ontologyBLASTP
40968724097306435putative plasmid stabilization proteinQuickGO ontologyBLASTP
40975994097940342hypothetical protein
40979714098813843hypothetical protein
409881041003121503integrase family proteinQuickGO ontologyBLASTP
4100445410051975tRNA-GlyQuickGO ontology
410067041028412172Tetratricopeptide TPR_2 repeat proteinQuickGO ontologyBLASTP
410282241040661245DegTDnrJEryC1StrS aminotransferaseQuickGO ontologyBLASTP
41041664104735570hypothetical proteinBLASTP
410476141060531293protein of unknown function DUF201QuickGO ontologyBLASTP
41064664106942477hypothetical proteinBLASTP
41069644107212249hypothetical proteinBLASTP
41072124107925714cyclic nucleotide-binding proteinQuickGO ontologyBLASTP
41082934108454162hypothetical protein
41084514109200750transcriptional regulator CrpFnr familyQuickGO ontologyBLASTP
41093004109578279hypothetical protein