Pre_GI Gene

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Host: NC_010688 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010688:4235528 Xanthomonas campestris pv. campestris, complete genome

Host Lineage: Xanthomonas campestris; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This genus consists of plant-specific yellow-pigmented microbes, some of which are economically important phytopathogens that devastate crops such as citrus plants, rice, beans, grape, and cotton. These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
423552842365831056dTDP-glucose 46-dehydrataseQuickGO ontologyBLASTP
42368124237558747hypothetical proteinBLASTP
42375584238502945Electron transfer flavoprotein alpha-subunitQuickGO ontologyBLASTP
42385624238909348hypothetical proteinBLASTP
423895842400611104nuceotide sugar aminotransferaseQuickGO ontologyBLASTP
42400464241017972glycosyltransferaseQuickGO ontologyBLASTP
42410144241943930bifunctional nucleotide hexosamine acetyltransferase isomeraseQuickGO ontologyBLASTP
42419304242370441hypothetical proteinBLASTP
424244042446922253integral membrane proteinQuickGO ontologyBLASTP
42448344245772939GDP-4-dehydro-D-rhamnose reductaseQuickGO ontologyBLASTP
424575642467901035GDP-mannose 46-dehydrataseQuickGO ontologyBLASTP
42468684247467600exported proteinQuickGO ontologyBLASTP
424750342492481746hypothetical proteinBLASTP
424926942503301062hypothetical proteinBLASTP
425038042526682289putative protein kinaseQuickGO ontologyBLASTP
425270842539941287ATP-binding component of an ABC-type polysaccharide exporterQuickGO ontologyBLASTP
42539914254833843permease protein of an ABC-type polysaccaharide exporterQuickGO ontologyBLASTP
425486042562451386hypothetical proteinBLASTP
425624242574411200CysMet metabolism PLP-dependent enzymeQuickGO ontologyBLASTP
425753542589051371Cystathionine beta-synthase probableQuickGO ontologyBLASTP
42591374259355219hypothetical proteinBLASTP
42596974260587891outer membrane proteinQuickGO ontologyBLASTP
42605844261060477outer membrane proteinQuickGO ontologyBLASTP
426106642621991134Tfp pilus assembly proteinQuickGO ontologyBLASTP
42627194263381663maleylacetoacetate isomeraseQuickGO ontologyBLASTP
42634254264414990Fumarylacetoacetate hydrolase family proteinQuickGO ontologyBLASTP
426479442661821389ATP-dependent RNA helicaseQuickGO ontologyBLASTP
426629842666513546-pyruvoyl tetrahydrobiopterin synthaseQuickGO ontologyBLASTP