Pre_GI Gene

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Host: NC_010688 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010688:3515885 Xanthomonas campestris pv. campestris, complete genome

Host Lineage: Xanthomonas campestris; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This genus consists of plant-specific yellow-pigmented microbes, some of which are economically important phytopathogens that devastate crops such as citrus plants, rice, beans, grape, and cotton. These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
35156283515888261hypothetical proteinBLASTP
35158853516700816HpaA proteinQuickGO ontologyBLASTP
35166973517644948HrcD proteinQuickGO ontologyBLASTP
35176553517897243HrpD6 proteinQuickGO ontologyBLASTP
35179833518255273type III secretion system pilus proteinQuickGO ontologyBLASTP
35183113518793483type III secretion system export control proteinQuickGO ontologyBLASTP
35190653520054990glycosylhydrolase-like type III secretion system proteinQuickGO ontologyBLASTP
35204283521294867hypothetical proteinBLASTP
352142435241892766type III secretion system host membrane insertion proteinQuickGO ontologyBLASTP
35251993525933735putative F420-dependent NADP reductaseQuickGO ontologyBLASTP
35260833526709627transcriptional regulator TetR familyQuickGO ontologyBLASTP
352679235279161125putative aspartate transaminaseQuickGO ontologyBLASTP
35279283528719792short-chain dehydrogenaseQuickGO ontologyBLASTP
352871635299631248isopenicillin-N epimeraseQuickGO ontologyBLASTP
35299993530808810hypothetical proteinBLASTP
35308183531603786hypothetical proteinBLASTP
35315963532408813BLASTP
35323773532700324BLASTP
35327713533301531hypothetical proteinBLASTP
353453535365081974putative Sir2-family regulatorQuickGO ontologyBLASTP
353650835379561449putative regulatory proteinQuickGO ontologyBLASTP
3538015353811096hypothetical protein
35381823538541360hypothetical proteinBLASTP
353858635401781593MobAMobL family proteinQuickGO ontologyBLASTP
35404373540763327hypothetical proteinBLASTP
35409483541298351hypothetical proteinBLASTP
35412923541852561hypothetical proteinBLASTP
354189435431351242hypothetical proteinBLASTP
35431473543797651putative membrane-anchored protein conserved in xanthomonadsQuickGO ontologyBLASTP
354383835478333996hypothetical proteinBLASTP
35478713548518648hypothetical proteinBLASTP
35490903549830741hypothetical protein
35498743550071198hypothetical proteinBLASTP
35501463550625480DNA repair protein radC homologQuickGO ontologyBLASTP
35508703551679810hypothetical proteinBLASTP
35521213552300180hypothetical protein
355238835537821395phage-related integraseQuickGO ontologyBLASTP
35539593554105147hypothetical protein
35541333554354222hypothetical protein
35543943554621228hypothetical protein
35546753555094420hypothetical protein
35550983555598501hypothetical protein
35556693556058390hypothetical protein
35560583556918861hypothetical protein
35570303557416387hypothetical proteinBLASTP
355750735586401134membrane-anchored nucleotide-binding enzymeQuickGO ontologyBLASTP
355866635606001935hypothetical proteinBLASTP