Pre_GI Gene

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Host: NC_010688 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010688:2781624 Xanthomonas campestris pv. campestris, complete genome

Host Lineage: Xanthomonas campestris; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This genus consists of plant-specific yellow-pigmented microbes, some of which are economically important phytopathogens that devastate crops such as citrus plants, rice, beans, grape, and cotton. These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
27816242782385762hypothetical proteinBLASTP
27824192782784366hypothetical proteinBLASTP
27827912783276486peptidylprolyl isomeraseQuickGO ontologyBLASTP
278328827845411254Putative secreted proteinQuickGO ontologyBLASTP
278452527858171293UDP-glucoseGDP-mannose dehydrogenaseQuickGO ontologyBLASTP
2785957278604084tRNA-LeuQuickGO ontology
27860562786220165BLASTP
27862982787065768IS1404 transposaseQuickGO ontologyBLASTP
27871372787400264IS1404 transposaseQuickGO ontologyBLASTP
27874252788063639putative transposase fragmentQuickGO ontologyBLASTP
278852327895931071protein-tyrosine-phosphatase putatively secreted as type III effectorQuickGO ontologyBLASTP
278968427910211338Avirulence protein AvrBs1QuickGO ontologyBLASTP
27912602792225966hypothetical proteinBLASTP
279231227934931182hypothetical proteinBLASTP
279348627955852100DNA helicaseQuickGO ontologyBLASTP
279558827979902403Site-specific DNA-methyltransferase adenine-specificQuickGO ontologyBLASTP
27980412798307267IS1477 transposase ORFAQuickGO ontologyBLASTP
27983402799173834IS1477 transposase ORFBQuickGO ontologyBLASTP
27994972799718222phage-related regulatory proteinQuickGO ontologyBLASTP
27997652800640876chromosome partitioning related proteinQuickGO ontologyBLASTP
28006242800884261hypothetical proteinBLASTP
280087728025201644hypothetical proteinBLASTP
28025362803096561hypothetical proteinBLASTP
280310028043261227hypothetical proteinBLASTP
28046482805403756hypothetical proteinBLASTP
28054002805933534hypothetical proteinBLASTP
28060072806447441single-stranded DNA binding proteinQuickGO ontologyBLASTP
280672728087392013DNA topoisomerase IIIQuickGO ontologyBLASTP
28092742810089816hypothetical proteinBLASTP
28099552810596642hypothetical proteinBLASTP
28106042811263660hypothetical proteinBLASTP
281129028125461257class-III aminotransferaseQuickGO ontologyBLASTP
281253028135731044hypothetical proteinBLASTP
28135662814432867hypothetical proteinBLASTP
28152672816256990IS1481 transposaseQuickGO ontologyBLASTP
28162612817115855ISXac3 transposaseQuickGO ontologyBLASTP
28171332817426294ISXac3 transposaseQuickGO ontologyBLASTP
28173802818204825ISXac3 transposaseQuickGO ontologyBLASTP
28182222818500279ISxac3 transposaseQuickGO ontologyBLASTP
281882828198411014hypothetical proteinBLASTP
282006828210871020IS1479 transposase-likeQuickGO ontologyBLASTP
28215222822451930hypothetical proteinBLASTP
28225132823193681hypothetical proteinBLASTP
28231902823609420hypothetical proteinBLASTP
28237372824387651hypothetical proteinBLASTP
282445128255601110hypothetical proteinBLASTP
28256092825929321hypothetical proteinBLASTP
28260182826317300hypothetical proteinBLASTP
282646728287462280conserved hypothetical plasmid proteinQuickGO ontologyBLASTP
28292292830209981IS1479 transposaseQuickGO ontologyBLASTP
283041428322281815ATP-dependent DNA helicaseQuickGO ontologyBLASTP
283221528340021788Hypothetical protein ybjDQuickGO ontologyBLASTP