Pre_GI Gene

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Host: NC_010688 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010688:2400471 Xanthomonas campestris pv. campestris, complete genome

Host Lineage: Xanthomonas campestris; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This genus consists of plant-specific yellow-pigmented microbes, some of which are economically important phytopathogens that devastate crops such as citrus plants, rice, beans, grape, and cotton. These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
239962924004748463-deoxy-manno-octulosonate cytidylyltransferaseQuickGO ontologyBLASTP
24004712400935465hypothetical proteinBLASTP
240093224023771446hypothetical proteinBLASTP
240237424042301857excinuclease ABC subunit CQuickGO ontologyBLASTP
24042302404862633CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferaseQuickGO ontologyBLASTP
2404899240497476tRNA-GlyQuickGO ontology
2405044240511774tRNA-CysQuickGO ontologyBLASTP
2405198240527376tRNA-GlyQuickGO ontology
240549624074331938phage-related integraseQuickGO ontologyBLASTP
24076062407812207transposase fragmentQuickGO ontologyBLASTP
24078332407982150Cointegrate resolution protein T fragmentQuickGO ontologyBLASTP
24080092408239231cointegrate resolution protein T fragmentQuickGO ontologyBLASTP
240837724096991323avirulence proteinQuickGO ontologyBLASTP
24102202410906687hypothetical proteinBLASTP
24109702411230261hypothetical peptideQuickGO ontologyBLASTP
24111102411712603putative IS1595-like transposase fragmentQuickGO ontologyBLASTP
24118032412066264IS1404 transposase ORFAQuickGO ontologyBLASTP
24121472412905759IS1404 transposase ORFBQuickGO ontologyBLASTP
24131282413394267ISxcc1 transposase ORFAQuickGO ontologyBLASTP
24134692414236768ISxcc1 transposase ORFBQuickGO ontologyBLASTP
24142382414483246putative IS1595-like transposase fragmentQuickGO ontologyBLASTP
24146202414754135hypothetical proteinBLASTP
24147822415666885Transcriptional regulator LysR familyQuickGO ontologyBLASTP
24158652416698834IS1477 transposase ORFBQuickGO ontologyBLASTP
24167312416997267IS1477 transposase ORFAQuickGO ontologyBLASTP
241704524182171173hypothetical proteinBLASTP
24183782419058681hypothetical protein
24191252419613489Peripheral-type benzodiazepine receptorQuickGO ontologyBLASTP
242033624228432508bifunctional aspartate kinase homoserine dehydrogenaseQuickGO ontologyBLASTP
24228402423808969hypothetical proteinBLASTP
24238772424296420hypothetical proteinBLASTP
242435324256601308hypothetical proteinBLASTP
24257602426500741Putative secreted proteinQuickGO ontologyBLASTP
24265922427353762Transcriptional regulator CrpFnr familyQuickGO ontologyBLASTP