Pre_GI Gene

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Host: NC_010688 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010688:1908012 Xanthomonas campestris pv. campestris, complete genome

Host Lineage: Xanthomonas campestris; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This genus consists of plant-specific yellow-pigmented microbes, some of which are economically important phytopathogens that devastate crops such as citrus plants, rice, beans, grape, and cotton. These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
19075121908015504Phosphoribosylaminoimidazole carboxylase catalytic subunitQuickGO ontologyBLASTP
190801219091541143Phosphoribosylaminoimidazole carboxylase ATPase subunitQuickGO ontologyBLASTP
19093871909965579hypothetical proteinBLASTP
19100871910407321hypothetical proteinBLASTP
19104041911144741putative secreted short-chain dehydrogenaseQuickGO ontologyBLASTP
19111411911740600Putative MarC transporter family proteinQuickGO ontologyBLASTP
191250219157473246TonB-dependent outer membrane receptor precursorQuickGO ontologyBLASTP
191585319172381386hypothetical proteinBLASTP
191723519182601026Sensor proteinQuickGO ontologyBLASTP
19183891918958570putative pilus assambly proteinQuickGO ontologyBLASTP
19189681919426459pre-pilin leader sequenceQuickGO ontologyBLASTP
19194231920394972hypothetical proteinBLASTP
19203911920963573hypothetical proteinBLASTP
192097319246743702putative Tfp pilus assembly proteinQuickGO ontologyBLASTP
19246741925084411hypothetical proteinBLASTP
19252601925811552Putative type IV pilus assembly protein FimTQuickGO ontologyBLASTP
192595119279722022excinuclease ABC subunit BQuickGO ontologyBLASTP
19285451928787243hypothetical proteinBLASTP
192882119304941674type IV secretion system coupling protein VirD4QuickGO ontologyBLASTP
19308441931254411hypothetical proteinBLASTP
193138419323911008VirB8-like type IV secretion system protein PtlEQuickGO ontologyBLASTP
19323881933155768exported VirB9-like type IV secretion system protein PtlFQuickGO ontologyBLASTP
193315219343211170type IV secretion system putative channel component VirB4QuickGO ontologyBLASTP
193431819353761059type IV secretion system energizing component VirB11QuickGO ontologyBLASTP
19354271936266840type IV secretion system lytic murein transglycosylase component VirB1QuickGO ontologyBLASTP
19363251936735411hypothetical proteinBLASTP
19367281937039312VirB3-like type IV secretion system outer membrane component PtlBQuickGO ontologyBLASTP
193713919395922454type IV secretion system energizing component VirB4QuickGO ontologyBLASTP
19395851940415831hypothetical proteinBLASTP
194051619415951080VirB6-like membrane proteinQuickGO ontologyBLASTP
19415981942086489hypothetical proteinBLASTP
19422251942815591hypothetical proteinBLASTP
194286319441881326hypothetical proteinBLASTP
194429219458151524VirB4 proteinQuickGO ontologyBLASTP
19458081946638831VirB5 proteinQuickGO ontologyBLASTP
194673919478181080VirB6-like membrane proteinQuickGO ontologyBLASTP
19478381948335498hypothetical proteinBLASTP
19485471949374828hypothetical proteinBLASTP
194948019507751296putative carboxpeptidaseQuickGO ontologyBLASTP
195144319530591617alpha-glucosidaseQuickGO ontologyBLASTP
195399719567592763TonB-dependent outer membrane maltodextrin receptor precursorQuickGO ontologyBLASTP
195708319591612079exported conserved hypothetical proteinQuickGO ontologyBLASTP
195927519615962322carbohydrate metabolism enzymeQuickGO ontologyBLASTP
196159319630711479Sucrosemaltose H symporterQuickGO ontologyBLASTP
196307119647441674exported cyclomaltodextrin glucanotransferaseQuickGO ontologyBLASTP