Pre_GI Gene

Some Help

Host: NC_010552 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010552:592154 Burkholderia ambifaria MC40-6 chromosome 2, complete sequence

Host Lineage: Burkholderia ambifaria; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from a cystic fibrosis patient. These bacteria present great versatility to adapt to diverse environments, and are capable of degrading pollutants in water and soil, and fixing atmospheric nitrogen. This species include strains isolated from cystic fibrosis patients as well as strains with potential use in biocontrol.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5921545939171764OmpAMotB domain proteinQuickGO ontologyBLASTP
593929594603675hypothetical proteinBLASTP
5946845960331350type VI secretion protein VC_A0114 familyQuickGO ontologyBLASTP
596614597126513type VI secretion protein VC_A0107 familyQuickGO ontologyBLASTP
5972005987501551type VI secretion protein EvpBVC_A0108 familyQuickGO ontologyBLASTP
5988296011682340Rhs element Vgr proteinQuickGO ontologyBLASTP
6011786038052628chitinase-like proteinQuickGO ontologyBLASTP
603807604364558hypothetical proteinBLASTP
6059066071411236hypothetical proteinBLASTP
6071386109563819protein of unknown function DUF1215QuickGO ontologyBLASTP
6109656125481584type VI secretion-associated protein VC_A0119 familyQuickGO ontologyBLASTP
6125586143721815type VI secretion protein VC_A0110 familyQuickGO ontologyBLASTP
6143696154931125type VI secretion protein VC_A0111 familyQuickGO ontologyBLASTP
615507616025519hypothetical proteinBLASTP
616090616380291muconolactone delta-isomeraseQuickGO ontologyBLASTP
616424617326903catechol 12-dioxygenaseQuickGO ontologyBLASTP
6173636184961134muconate and chloromuconate cycloisomeraseQuickGO ontologyBLASTP