Pre_GI Gene

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Host: NC_010552 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010552:335989 Burkholderia ambifaria MC40-6 chromosome 2, complete sequence

Host Lineage: Burkholderia ambifaria; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from a cystic fibrosis patient. These bacteria present great versatility to adapt to diverse environments, and are capable of degrading pollutants in water and soil, and fixing atmospheric nitrogen. This species include strains isolated from cystic fibrosis patients as well as strains with potential use in biocontrol.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
3359893375331545transcriptional regulator LuxR familyQuickGO ontologyBLASTP
337697337888192CsbD family proteinQuickGO ontologyBLASTP
3383023394531152Extracellular ligand-binding receptorQuickGO ontologyBLASTP
3396483408201173FAD dependent oxidoreductaseQuickGO ontologyBLASTP
341177341770594heat shock protein DnaJ domain proteinQuickGO ontologyBLASTP
3419503431101161Integrase catalytic regionQuickGO ontologyBLASTP
343413344183771short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
344329344883555OsmC family proteinQuickGO ontologyBLASTP
345128345691564transcriptional regulator TetR familyQuickGO ontologyBLASTP
345818346159342alkylhydroperoxidase like protein AhpD familyQuickGO ontologyBLASTP
346229346909681DSBA oxidoreductaseQuickGO ontologyBLASTP
3470673481731107NADHflavin oxidoreductaseNADH oxidaseQuickGO ontologyBLASTP
3485553497631209aminotransferase class I and IIQuickGO ontologyBLASTP
3498223500402194-oxalocrotonate tautomeraseQuickGO ontologyBLASTP
3503323522571926DNA-directed DNA polymeraseQuickGO ontologyBLASTP
352440352784345hypothetical proteinBLASTP
352959353291333hypothetical protein
353512353796285hypothetical protein
353833354084252hypothetical protein
354105354380276putative transposaseQuickGO ontologyBLASTP
354604354990387transcriptional regulator MerR familyQuickGO ontologyBLASTP
355077355985909alphabeta hydrolase foldQuickGO ontologyBLASTP
356014356586573transcriptional regulator LuxR familyQuickGO ontologyBLASTP