Pre_GI Gene

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Host: NC_010552 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010552:2454776 Burkholderia ambifaria MC40-6 chromosome 2, complete sequence

Host Lineage: Burkholderia ambifaria; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from a cystic fibrosis patient. These bacteria present great versatility to adapt to diverse environments, and are capable of degrading pollutants in water and soil, and fixing atmospheric nitrogen. This species include strains isolated from cystic fibrosis patients as well as strains with potential use in biocontrol.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
24547762455564789transcriptional regulator IclR familyQuickGO ontologyBLASTP
245584424569591116Succinylglutamate desuccinylaseaspartoacylaseQuickGO ontologyBLASTP
245714524584761332major facilitator superfamily MFS_1QuickGO ontologyBLASTP
245853324597231191amidohydrolaseQuickGO ontologyBLASTP
24603692460794426hypothetical protein
24613732462260888transcriptional regulator LysR familyQuickGO ontologyBLASTP
24624042463156753short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
24633172463997681Glutathione S-transferase domainQuickGO ontologyBLASTP
24643062465085780short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
24652922466242951transcriptional regulator LysR familyQuickGO ontologyBLASTP
246637224676491278Ribulose-bisphosphate carboxylaseQuickGO ontologyBLASTP
246765524690641410type III effector Hrp-dependent outerQuickGO ontologyBLASTP
246930124707551455pyruvate kinaseQuickGO ontologyBLASTP
24712312471389159
247183824737481911TRAP dicarboxylate transporter DctM subunitQuickGO ontologyBLASTP
247374524747761032TRAP dicarboxylate transporter DctP subunitQuickGO ontologyBLASTP
24756872476373687transcriptional regulator LysR familyQuickGO ontologyBLASTP
247705224786681617tryptophan halogenaseQuickGO ontologyBLASTP
247866824797531086Domain of unknown function DUF1864QuickGO ontologyBLASTP
247979824814981701FAD dependent oxidoreductaseQuickGO ontologyBLASTP
248152424826361113Rieske 2Fe-2S domain proteinQuickGO ontologyBLASTP
248273624837371002Alcohol dehydrogenase GroES domain proteinQuickGO ontologyBLASTP
24838052484668864alphabeta hydrolase foldQuickGO ontologyBLASTP
24850692485857789short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
248591524869971083NADHflavin oxidoreductaseNADH oxidaseQuickGO ontologyBLASTP