Pre_GI Gene

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Host: NC_010552 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010552:2331486 Burkholderia ambifaria MC40-6 chromosome 2, complete sequence

Host Lineage: Burkholderia ambifaria; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from a cystic fibrosis patient. These bacteria present great versatility to adapt to diverse environments, and are capable of degrading pollutants in water and soil, and fixing atmospheric nitrogen. This species include strains isolated from cystic fibrosis patients as well as strains with potential use in biocontrol.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
233148623339302445MscS Mechanosensitive ion channelQuickGO ontologyBLASTP
233398223354271446outer membrane efflux proteinQuickGO ontologyBLASTP
233541723367601344type I secretion membrane fusion protein HlyD familyQuickGO ontologyBLASTP
233675723389432187type I secretion system ATPaseQuickGO ontologyBLASTP
233904723436514605Hemolysin-type calcium-binding regionQuickGO ontologyBLASTP
23437492344360612hypothetical proteinBLASTP
234493623464471512Aldehyde DehydrogenaseQuickGO ontologyBLASTP
234692323488781956FAD dependent oxidoreductaseQuickGO ontologyBLASTP
23489972349671675transcriptional regulator TetR familyQuickGO ontologyBLASTP
234980123515821782phospholipase DTransphosphatidylaseQuickGO ontologyBLASTP
23516862352444759transcriptional regulator DeoR familyQuickGO ontologyBLASTP
23526502352835186hypothetical protein
23531142353983870protein of unknown function DUF6 transmembraneQuickGO ontologyBLASTP