Pre_GI Gene

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Host: NC_010552 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010552:1212000 Burkholderia ambifaria MC40-6 chromosome 2, complete sequence

Host Lineage: Burkholderia ambifaria; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from a cystic fibrosis patient. These bacteria present great versatility to adapt to diverse environments, and are capable of degrading pollutants in water and soil, and fixing atmospheric nitrogen. This species include strains isolated from cystic fibrosis patients as well as strains with potential use in biocontrol.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
12120561212973918transcriptional regulator MarR familyQuickGO ontologyBLASTP
12131211213870750short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
121393612156361701LevanaseQuickGO ontologyBLASTP
121572412173041581LevansucraseQuickGO ontologyBLASTP
121747512185091035transcriptional regulator LacI familyQuickGO ontologyBLASTP
121891412212682355type VI secretion system Vgr family proteinQuickGO ontologyBLASTP
12212651221858594putative VGR-related proteinQuickGO ontologyBLASTP
122186212238682007phospholipase DTransphosphatidylaseQuickGO ontologyBLASTP
122394112251791239Sel1 domain protein repeat-containing proteinQuickGO ontologyBLASTP
12252021225489288hypothetical proteinBLASTP
12258991226585687ThiJPfpI domain proteinQuickGO ontologyBLASTP
122672012278291110NADHflavin oxidoreductaseNADH oxidaseQuickGO ontologyBLASTP
122799112290611071protein of unknown function UPF0118QuickGO ontologyBLASTP
12292611229659399hypothetical protein
12296931230487795short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
12306491231497849transcriptional regulator AraC familyQuickGO ontologyBLASTP
12315881232193606Lysine exporter protein LYSEYGGAQuickGO ontologyBLASTP
123228912337371449heavy metal sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
12337341234429696two component heavy metal response transcriptional regulator winged helix familyQuickGO ontologyBLASTP