Pre_GI Gene

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Host: NC_010524 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010524:2761394 Leptothrix cholodnii SP-6, complete genome

Host Lineage: Leptothrix cholodnii; Leptothrix; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Leptothrix cholodnii SP-6 was isolated from water and flocculent from an artificial iron seep in Ithaca, NY, USA. Leptothrix cholodnii, like other Leptothrix species is an iron- and manganese-oxidizing, sheathed bacterium common in organic rich aquatic environments. Iron oxides and manganese oxides often coat the sheathes of these organisms.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
27607842761401618CDP-alcohol phosphatidyltransferaseQuickGO ontologyBLASTP
27613942762257864hypothetical protein
27622542763183930protein of unknown function DUF692QuickGO ontologyBLASTP
27632082763495288putative signal peptide proteinQuickGO ontologyBLASTP
27636402764209570RNA polymerase sigma-24 subunit ECF subfamilyQuickGO ontologyBLASTP
27642152764409195hypothetical protein
276441427653709572-nitropropane dioxygenase NPDQuickGO ontologyBLASTP
276537027671601791acyl-CoA dehydrogenase domain proteinQuickGO ontologyBLASTP
27672812768207927Electron transfer flavoprotein alpha subunitQuickGO ontologyBLASTP
27682102768959750Electron transfer flavoprotein alphabeta-subunitQuickGO ontologyBLASTP
27691492769967819glutamate racemaseQuickGO ontologyBLASTP
2770019277010789tRNA-LeuQuickGO ontology
2770323277039674tRNA-CysQuickGO ontology
277063127730482418ATP-dependent protease LaQuickGO ontologyBLASTP
277316727744411275ATP-dependent Clp protease ATP-binding subunit ClpXQuickGO ontologyBLASTP
27744802775088609ATP-dependent Clp protease proteolytic subunit ClpPQuickGO ontologyBLASTP
277525927765661308trigger factorQuickGO ontologyBLASTP
2776607277669387tRNA-LeuQuickGO ontology
277683527799783144acriflavin resistance proteinQuickGO ontologyBLASTP
278001027811911182efflux transporter RND family MFP subunitQuickGO ontologyBLASTP
27813332782163831squalene synthase HpnCQuickGO ontologyBLASTP
27822442783080837squalene synthase HpnDQuickGO ontologyBLASTP
278307027843681299squalene-associated FAD-dependent desaturaseQuickGO ontologyBLASTP