Pre_GI Gene

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Host: NC_010473 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010473:2183567 Escherichia coli str. K-12 substr. DH10B, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
21835672184157591imidazole glycerol phosphate synthase glutamine amidotransferase subunit with HisFQuickGO ontologyBLASTP
21841572184894738N-5-phospho-L-ribosyl-formimino-5-amino-1- 5-phosphoribosyl-4-imidazolecarboxamide isomeraseQuickGO ontologyBLASTP
21848762185652777imidazole glycerol phosphate synthase catalytic subunit with HisHQuickGO ontologyBLASTP
21856462186257612fused phosphoribosyl-AMP cyclohydrolase phosphoribosyl-ATP pyrophosphataseQuickGO ontologyBLASTP
21863532187333981regulator of length of O-antigen component of lipopolysaccharide chainsQuickGO ontologyBLASTP
218747921886451167UDP-glucose 6-dehydrogenaseQuickGO ontologyBLASTP
218889421903001407gluconate-6-phosphate dehydrogenase decarboxylatingQuickGO ontologyBLASTP
219092721919431017IS5 transposase and trans-activatorQuickGO ontologyBLASTP
219242321935411119lipopolysaccharide biosynthesis proteinQuickGO ontologyBLASTP
21935262194116591predicted acyl transferaseQuickGO ontologyBLASTP
21940972195089993hypothetical proteinBLASTP
219509221962581167O-antigen polymeraseQuickGO ontologyBLASTP
219625821973611104UDP-galactopyranose mutase FADNADP-bindingQuickGO ontologyBLASTP
219736921986161248predicted polisoprenol-linked O-antigen transporterQuickGO ontologyBLASTP
21986132199170558dTDP-4-deoxyrhamnose-35-epimeraseQuickGO ontologyBLASTP
21991702200051882glucose-1-phosphate thymidylyltransferaseQuickGO ontologyBLASTP
22001092201008900dTDP-4-dehydrorhamnose reductase subunit NADP-binding of dTDP-L-rhamnose synthaseQuickGO ontologyBLASTP
220100822020931086dTDP-glucose 46 dehydratase NADP-bindingQuickGO ontologyBLASTP
22024662203359894predicted subunit with GalUQuickGO ontologyBLASTP
220353422049281395predicted colanic acid biosynthesis proteinQuickGO ontologyBLASTP
220493922061591221predicted glycosyl transferaseQuickGO ontologyBLASTP
220615622074361281predicted pyruvyl transferaseQuickGO ontologyBLASTP
220771222091901479colanic acid exporterQuickGO ontologyBLASTP
220919222105861395predicted UDP-glucose lipid carrier transferaseQuickGO ontologyBLASTP
221064122120111371phosphomannomutaseQuickGO ontologyBLASTP