Pre_GI Gene

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Host: NC_010001 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010001:1702350 Clostridium phytofermentans ISDg, complete genome

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
169908417023563273protein of unknown function DUF214QuickGO ontologyBLASTP
17023501703054705ABC transporter relatedQuickGO ontologyBLASTP
17032621703882621transcriptional regulator TetR familyQuickGO ontologyBLASTP
17042061704727522bifunctional deaminase-reductase domain proteinQuickGO ontologyBLASTP
170479517066631869heavy metal translocating P-type ATPaseQuickGO ontologyBLASTP
17068291707374546transcriptional regulator TetR familyQuickGO ontologyBLASTP
170804417092551212glutamyl-tRNA reductaseQuickGO ontologyBLASTP
17092681709735468siroheme synthaseQuickGO ontologyBLASTP
17097411710628888porphobilinogen deaminaseQuickGO ontologyBLASTP
171062517121331509uroporphyrin-III C-methyltransferaseQuickGO ontologyBLASTP
17121701713165996Porphobilinogen synthaseQuickGO ontologyBLASTP
171316517144481284glutamate-1-semialdehyde-21-aminomutaseQuickGO ontologyBLASTP
171460617157631158cobalamin biosynthesis protein CbiDQuickGO ontologyBLASTP
17157391716422684precorrin-2 C20-methyltransferaseQuickGO ontologyBLASTP
17164241717182759precorrin-4 C11-methyltransferaseQuickGO ontologyBLASTP
171729617183511056cobalamin vitamin B12 biosynthesis CbiG proteinQuickGO ontologyBLASTP
17183481719076729precorrin-3B C17-methyltransferaseQuickGO ontologyBLASTP
171911917210861968precorrin-6x reductaseQuickGO ontologyBLASTP
172110117224591359cobyrinic acid ac-diamide synthaseQuickGO ontologyBLASTP
17224961723020525ATPcorrinoid adenosyltransferase BtuRCobOCobPQuickGO ontologyBLASTP
17230331723677645Precorrin-8X methylmutase CbiCCobHQuickGO ontologyBLASTP
17243271725226900cobalt ABC transporter inner membrane subunit CbiQQuickGO ontologyBLASTP
17252471726098852ABC transporter relatedQuickGO ontologyBLASTP
17261691726921753cobalamin biosynthesis protein CbiMQuickGO ontologyBLASTP
17269211727253333Cobalt transport protein CbiNQuickGO ontologyBLASTP
17274211728206786anaerobic cobalt chelataseQuickGO ontologyBLASTP
17284401729198759hypothetical protein