Pre_GI Gene

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Host: NC_009952 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009952:2381601 Dinoroseobacter shibae DFL 12, complete genome

Host Lineage: Dinoroseobacter shibae; Dinoroseobacter; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This aerobic anoxygenic phototroph was isolated from cultivated marine dinoflagellates originally from the Bay of Tokyo, Japan. Liquid cultures grown in the dark are distinctly pink, while colonies on complex agar media are dark red.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
238160123835951995RNA polymerase sigma factorQuickGO ontologyBLASTP
238371723856691953DNA primaseQuickGO ontologyBLASTP
23857252386303579putative sarcosine oxidaseQuickGO ontology
238629623892382943putative sarcosine oxidaseQuickGO ontologyBLASTP
23892352389498264putative sarcosine oxidaseQuickGO ontologyBLASTP
238992623911761251putative sarcosine oxidase beta subunitQuickGO ontologyBLASTP
239148423931451662hypothetical proteinBLASTP
23931422393666525hypothetical proteinBLASTP
23936762394230555hypothetical proteinBLASTP
23942272394736510hypothetical protein
23947362395365630transcriptional regulatorQuickGO ontologyBLASTP
23953802395685306hypothetical protein
239576523970511287homoserine dehydrogenaseQuickGO ontologyBLASTP
23971772398148972fructose-16-bisphosphatase class IIQuickGO ontologyBLASTP
239815023999071758single-stranded-DNA-specific exonucleaseQuickGO ontologyBLASTP
2399989240006375tRNA-GluQuickGO ontologyBLASTP
24003642400894531hypothetical proteinBLASTP
240089124021621272molybdopterin biosynthesis proteinQuickGO ontologyBLASTP
240224724049192673dimethyl sulfoxide reductase precursorQuickGO ontologyBLASTP
24050342405738705two component transcriptional regulatorQuickGO ontologyBLASTP
240570824084942787signal transduction histidine kinaseQuickGO ontologyBLASTP
24085172409482966periplasmic binding proteinQuickGO ontologyBLASTP
24097762410660885putative transcriptional regulatorQuickGO ontologyBLASTP
241087224125361665phenylacetone monooxygenaseQuickGO ontologyBLASTP
241260624137931188hypothetical proteinBLASTP
24138572414513657hypothetical proteinBLASTP
24148152415318504hypothetical proteinBLASTP
241531524172341920putative TRAP transporterQuickGO ontologyBLASTP
24172552418247993putative TRAP transporter solute receptorQuickGO ontologyBLASTP