Pre_GI Gene

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Host: NC_009831 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009831:3583856 Shewanella sediminis HAW-EB3, complete genome

Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
358385635855831728TrkA-C domain proteinQuickGO ontologyBLASTP
358584535872661422Sulfate adenylyltransferaseQuickGO ontologyBLASTP
35874863588391906sulfate adenylyltransferase small subunitQuickGO ontologyBLASTP
358899335905731581beta-lactamase domain proteinQuickGO ontologyBLASTP
359102735922261200hypothetical proteinBLASTP
35923533593267915hypothetical proteinBLASTP
35933013593987687glycosyl transferase WecBTagACpsF familyQuickGO ontologyBLASTP
359408435952231140UDP-N-acetylglucosamine 2-epimeraseQuickGO ontologyBLASTP
359564935967491101UDP-N-acetylglucosamine 2-epimeraseQuickGO ontologyBLASTP
35968383597374537Acetyltransferase isoleucine patch superfamily-like proteinQuickGO ontologyBLASTP
359737135987201350Membrane protein involved in the export of O-antigen and teichoic acid-like proteinQuickGO ontologyBLASTP
359872035998201101DegTDnrJEryC1StrS family proteinQuickGO ontologyBLASTP
35998263600404579putative acetyltransferaseQuickGO ontologyBLASTP
36004753601419945MviM proteinQuickGO ontologyBLASTP
360142236026931272UDP-glucoseGDP-mannose dehydrogenaseQuickGO ontologyBLASTP
360275836040591302hypothetical proteinBLASTP
36040783605031954chain length determinant family proteinQuickGO ontologyBLASTP
36050783605530453hypothetical proteinBLASTP
36055273606009483hypothetical proteinBLASTP