Pre_GI Gene

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Host: NC_009831 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009831:3092126 Shewanella sediminis HAW-EB3, complete genome

Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
30921263092899774imidazoleglycerol phosphate synthase cyclase subunitQuickGO ontologyBLASTP
30929753093604630phosphoribosyl-AMP cyclohydrolaseQuickGO ontologyBLASTP
30938793094658780conserved hypothetical amino acid ABC transporterQuickGO ontology
30948083095020213hypothetical proteinBLASTP
30951063095924819extracellular solute-binding protein family 3QuickGO ontologyBLASTP
309624630973521107Phosphoribosylaminoimidazolesuccinocarboxamide synthaseQuickGO ontologyBLASTP
30974583098027570hypothetical proteinBLASTP
309802031021114092proprotein convertase PQuickGO ontologyBLASTP
310209831036931596hypothetical proteinBLASTP
31037413104079339hypothetical proteinBLASTP
310454831057561209porin gram-negative typeQuickGO ontologyBLASTP
31073453107677333hypothetical proteinBLASTP
31076523108119468hypothetical protein
31082403108515276hypothetical protein
310923231107041473RNA-directed DNA polymeraseQuickGO ontologyBLASTP
31109803111825846universal stress protein familyQuickGO ontologyBLASTP
311183931133261488sulfate transporterQuickGO ontologyBLASTP