Pre_GI Gene

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Host: NC_009482 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009482:156171 Synechococcus sp. RCC307 chromosome, complete genome

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: Marine Synechococcus and Prochlorococcus are the most abundant photosynthetic organisms on earth and between them account for about half of the world's photosynthesis. RCC307 is an oceanic Synechococcus strain which presents great phylogenetic interest because trees obtained using its 16S RNA gene seem to indicate that it is rooted at the base of the radiation of marine cyanobacteria. This strain was isolated from seawater taken at a depth of 15 meters from the Mediterranean Sea.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1551911562041014UDP-glucose 4-epimeraseQuickGO ontologyBLASTP
1561711582132043selenophosphate synthaseFADNADP-binding domain-containing proteinQuickGO ontologyBLASTP
1582101602252016hypothetical proteinBLASTP
160200160508309hypothetical proteinBLASTP
160468161358891glyscosytransferaseQuickGO ontologyBLASTP
1613421625741233tRNA nucleotidyltransferasepolyA polymeraseQuickGO ontologyBLASTP
1625331640531521glycosyl transferase family proteinQuickGO ontologyBLASTP
1640531651831131glycosyltransferseQuickGO ontology
1651801664001221hypothetical protein
166419167366948hypothetical proteinBLASTP
167397168170774hypothetical protein
1681671693481182polysaccharide export periplasmic proteinQuickGO ontologyBLASTP
1693581705511194hypothetical protein
1705791725131935nucleotide-diphosphate-sugar epimerase membrane associatedQuickGO ontologyBLASTP
1725101738441335lipopolysaccharide synthesis sugar transferaseQuickGO ontologyBLASTP
1738411750461206glycosyltransferaseQuickGO ontologyBLASTP
1750101766981689asparagine synthaseQuickGO ontologyBLASTP
176910177728819glycosyltransferaseQuickGO ontologyBLASTP
1777281789151188glycosyltransferaseQuickGO ontologyBLASTP
178915179841927glycosyltransferaseQuickGO ontologyBLASTP
1797541809441191glycosyltransferaseQuickGO ontologyBLASTP
1814571833011845multidrug ABC transporter ATPase and permeaseQuickGO ontologyBLASTP
183314184021708hypothetical proteinBLASTP
183973184935963glycosyltransferaseQuickGO ontologyBLASTP
1849321861491218glycosyltransferaseQuickGO ontologyBLASTP
1861341871561023hypothetical proteinBLASTP
1871531881661014NAD dependent epimerasedehydrataseQuickGO ontologyBLASTP
188163189104942nucleoside-diphosphate-sugar epimeraseQuickGO ontologyBLASTP
1891041904771374UDP-glucose 6-dehydrogenaseQuickGO ontologyBLASTP