Pre_GI Gene

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Host: NC_009457 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009457:2764972 Vibrio cholerae O395 chromosome 2, complete sequence

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Aquatic organism that causes Cholera. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2763692276501113203-deoxy-D-manno-octulosonic-acid transferaseQuickGO ontologyBLASTP
27649722765760789hypothetical proteinBLASTP
276575727668061050lipopolysaccharide biosynthesis proteinQuickGO ontologyBLASTP
276680327678431041ADP-heptose--LPS heptosyltransferase IIQuickGO ontologyBLASTP
276784027690391200hypothetical proteinBLASTP
27690412769607567hexapaptide repeat-containing transferaseQuickGO ontologyBLASTP
276961527713871773hypothetical proteinBLASTP
27715462772490945ADP-L-glycero-D-manno-heptose-6-epimeraseQuickGO ontologyBLASTP
277293227743291398mannose-1-phosphate guanylyltransferaseQuickGO ontologyBLASTP
277433227757231392phosphomannomutaseQuickGO ontologyBLASTP
277572627768471122GDP-mannose 46-dehydrataseQuickGO ontologyBLASTP
277685827779611104perosamine synthaseQuickGO ontologyBLASTP
277795827793491392rfbG proteinQuickGO ontologyBLASTP
27793212780115795lipopolysaccharideO-antigen transport proteinQuickGO ontologyBLASTP
27800542780869816lipopolysaccharideO-antigen transport proteinQuickGO ontologyBLASTP
27809082781150243acyl carrier proteinQuickGO ontologyBLASTP
278115627825711416rfbL proteinQuickGO ontologyBLASTP
278258027837041125iron-containing alcohol dehydrogenase family protein RfbMQuickGO ontologyBLASTP
278369527861722478acyl protein synthaseacyl-CoA reductase RfbNQuickGO ontologyBLASTP
27862422786808567acetyltransferaseQuickGO ontologyBLASTP
27871962787393198BLASTP
27875802787705126hypothetical proteinBLASTP
27877102788096387hypothetical proteinBLASTP
27884932789353861RfbT proteinQuickGO ontologyBLASTP
278938827905001113lipopolysaccharide biosynthesis protein RfbVQuickGO ontologyBLASTP
279050827923731866mannosyl-transferaseQuickGO ontologyBLASTP
27925262793497972UDP-glucose 4-epimeraseQuickGO ontologyBLASTP
27935052794059555capsule biosynthesis proteinQuickGO ontologyBLASTP
27940462794162117hypothetical proteinBLASTP
279420227955691368hypothetical proteinBLASTP
279583127970691239hypothetical proteinBLASTP
27971242797696573hypothetical proteinBLASTP
27976962798619924D-isomer specific 2-hydroxyacid dehydrogenase family proteinQuickGO ontologyBLASTP
27986122799280669hypothetical proteinBLASTP
279964328008421200mannose-6-phosphate isomeraseQuickGO ontologyBLASTP
28008082801788981ROK family proteinQuickGO ontologyBLASTP