Pre_GI Gene

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Host: NC_008686 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008686:405159 Paracoccus denitrificans PD1222 chromosome 1, complete sequence

Host Lineage: Paracoccus denitrificans; Paracoccus; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This organism is commonly found in soil and sewage sludge. This organism is able to survive in both aerobic and anaerobic environments due to its ability to use both oxygen and nitrogenous oxides making it a popular model organism for the study of electron transfer and and energy conservation.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
405159406109951Sua5YciOYrdCYwlC family proteinQuickGO ontologyBLASTP
406113406685573protein of unknown function DUF179QuickGO ontologyBLASTP
406794407576783hypothetical proteinBLASTP
407573408388816phage SPO1 DNA polymerase-related proteinQuickGO ontologyBLASTP
408494408895402hypothetical protein
40905041017111223-isopropylmalate dehydrogenaseQuickGO ontologyBLASTP
410232411185954protein of unknown function DUF6 transmembraneQuickGO ontologyBLASTP
41126241133877tRNA-ProQuickGO ontology
411827412228402hypothetical protein
412240412752513protein of unknown function DUF955QuickGO ontologyBLASTP
4127644138401077hypothetical proteinBLASTP
414070414585516hypothetical proteinBLASTP
4151414161781038zinc finger CHC2-family proteinQuickGO ontologyBLASTP
4161754193633189hypothetical proteinBLASTP
419360420268909hypothetical proteinBLASTP
420268421179912Exonuclease RNase T and DNA polymerase IIIQuickGO ontologyBLASTP
421270421986717hypothetical proteinBLASTP
421964422515552hypothetical proteinBLASTP
422858423403546BLASTP
423504423761258hypothetical protein
423758424588831hypothetical protein
424675424929255helix-turn-helix domain proteinQuickGO ontologyBLASTP
425445425816372hypothetical protein
425929426456528hypothetical proteinBLASTP
4264664285982133Integrase catalytic regionQuickGO ontologyBLASTP
428588429586999transposition protein putativeQuickGO ontologyBLASTP
4295884310691482hypothetical proteinBLASTP
4312344327511518Integrase catalytic regionQuickGO ontologyBLASTP
432748433326579IstB domain protein ATP-binding proteinQuickGO ontologyBLASTP
433296434282987RecombinaseQuickGO ontologyBLASTP
434326435324999transposase IS116IS110IS902 family proteinQuickGO ontologyBLASTP
435638435778141BLASTP
4362864373711086ABC transporter relatedQuickGO ontologyBLASTP
4373844384481065putative spermidineputrescine-binding proteinQuickGO ontologyBLASTP
4384454396951251binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
439692440477786binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP