Pre_GI Gene

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Host: NC_008686 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008686:1439328 Paracoccus denitrificans PD1222 chromosome 1, complete sequence

Host Lineage: Paracoccus denitrificans; Paracoccus; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This organism is commonly found in soil and sewage sludge. This organism is able to survive in both aerobic and anaerobic environments due to its ability to use both oxygen and nitrogenous oxides making it a popular model organism for the study of electron transfer and and energy conservation.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
14386421439331690Conjugal transfer proteinQuickGO ontologyBLASTP
143932814406801353TrbLVirB6 plasmid conjugal transfer proteinQuickGO ontologyBLASTP
14406841440971288hypothetical proteinBLASTP
14409891441771783conjugal transfer protein TrbJQuickGO ontologyBLASTP
144176814442782511AAA ATPaseQuickGO ontologyBLASTP
14442851444578294conjugal transfer protein trbBQuickGO ontologyBLASTP
14446451444977333Conjugal transfer protein TrbCQuickGO ontologyBLASTP
14449741445972999type II secretion system protein EQuickGO ontologyBLASTP
14463451447265921helix-turn-helix- domain containing protein AraC typeQuickGO ontologyBLASTP
144735414494352082TonB-dependent receptorQuickGO ontologyBLASTP
144943514504451011Methyltransferase type 12QuickGO ontologyBLASTP
14504471451349903putative sulfonatenitrate transport system substrate-binding proteinQuickGO ontologyBLASTP
14513491452080732binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
14520771452658582ABC transporter relatedQuickGO ontologyBLASTP
14526681453366699transcriptional regulator TetR familyQuickGO ontologyBLASTP
145340614551841779ABC transporter relatedQuickGO ontologyBLASTP
145518114570011821ABC transporter relatedQuickGO ontologyBLASTP
145708414582441161monooxygenase FAD-bindingQuickGO ontologyBLASTP
145824814602361989TonB-dependent receptorQuickGO ontologyBLASTP
146023314614201188major facilitator superfamily MFS_1QuickGO ontologyBLASTP
146157914625801002helix-turn-helix- domain containing protein AraC typeQuickGO ontologyBLASTP
146260114638271227major facilitator superfamily MFS_1QuickGO ontologyBLASTP
146383014657791950TonB-dependent receptorQuickGO ontologyBLASTP
14660691467028960helix-turn-helix- domain containing protein AraC typeQuickGO ontologyBLASTP
14673571467746390protein of unknown function DUF454QuickGO ontologyBLASTP
14677331468083351hypothetical proteinBLASTP
146807014692871218monooxygenase FAD-bindingQuickGO ontologyBLASTP