Pre_GI Gene

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Host: NC_008544 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008544:55451 Burkholderia cenocepacia HI2424 chromosome 3, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
53583554541872AmidaseQuickGO ontologyBLASTP
55451590683618Biotin carboxylation regionQuickGO ontologyBLASTP
5915759813657hypothetical proteinBLASTP
5982560580756hypothetical proteinBLASTP
6078061046267hypothetical proteinBLASTP
61466624881023ABC transport system substrate-binding proteinQuickGO ontologyBLASTP
6263663355720metallophosphoesteraseQuickGO ontologyBLASTP
6363964088450GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
6448165005525GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
6510865539432NUDIX hydrolaseQuickGO ontologyBLASTP
6583366114282hypothetical protein
6642666992567protein of unknown function DUF925QuickGO ontologyBLASTP
6725168213963transcriptional regulator LysR familyQuickGO ontologyBLASTP
6902869261234hypothetical proteinBLASTP
69400705211122histidine kinaseQuickGO ontologyBLASTP
70767720321266poly3-hydroxybutyrate depolymerase-like proteinQuickGO ontologyBLASTP
72080739151836periplasmic sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
73933753511419response regulator receiver modulated metal dependent phosphohydrolaseQuickGO ontologyBLASTP
7547375928456GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
7618676590405hypothetical proteinBLASTP
76761779661206sodiumdicarboxylate symporterQuickGO ontologyBLASTP
7798378645663transcriptional regulator GntR familyQuickGO ontologyBLASTP