Pre_GI: BLASTP Hits

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Query: NC_008544:55451:70767 Burkholderia cenocepacia HI2424 chromosome 3, complete sequence

Start: 70767, End: 72032, Length: 1266

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008062:81338:9294992949942141266Burkholderia cenocepacia AU 1054 chromosome 3, complete sequencepoly(3-hydroxybutyrate) depolymerase-like0649
NC_010801:238430:2442422442422453661125Burkholderia multivorans ATCC 17616 chromosome 3, completepoly(3-hydroxybutyrate) depolymerase2e-108392
NC_012721:2021885:2044340204434020453741035Burkholderia glumae BGR1 chromosome 2, complete genomePolyhydroxybutyrate depolymerase domain protein8e-57221
NC_015727:764744:7660787660787672681191Cupriavidus necator N-1 plasmid BB1p, complete sequencepoly(3-hydroxyalkanoate) depolymerase1e-27124
NC_017249:3119000:3133550313355031347401191Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-25117
NC_004463:5540924:5540924554092455421141191Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein2e-24114
NC_018012:1076839:1082648108264810837541107Thiocystis violascens DSM 198 chromosome, complete genomeesterase, PHB depolymerase family3e-24113
NC_013757:1212308:1237229123722912384611233Geodermatophilus obscurus DSM 43160, complete genomeesterase, PHB depolymerase family5e-23108
NC_008314:2686851:2711012271101227121091098Ralstonia eutropha H16 chromosome 2, complete sequencePoly(3-hydroxybutyrate) depolymerase4e-21102
NC_016590:548312:5564955564955576371143Burkholderia sp. YI23 chromosome 3, complete sequenceesterase, poly(3-hydroxybutyrate) depolymerase3e-20100
NC_012560:3416451:3424243342424334255321290Azotobacter vinelandii DJ, complete genomeesterase, poly(3-hydroxybutyrate) depolymerase2e-1997.4
NC_021150:3416450:3424242342424234255311290Azotobacter vinelandii CA6, complete genomeesterase, poly(3-hydroxybutyrate) depolymerase2e-1997.4
NC_012808:1122341:112641111264111127316906Methylobacterium extorquens AM1, complete genomeEsterase, PHB depolymerase (C-terminal fragment)3e-1996.7
NC_018681:867230:895793895793896755963Nocardia brasiliensis ATCC 700358 chromosome, complete genomeesterase, PHB depolymerase2e-1273.9
NC_013159:3423500:344169934416993442694996Saccharomonospora viridis DSM 43017, complete genomeesterase, PHB depolymerase family9e-1271.6
NC_015711:2050360:205346620534662054344879Myxococcus fulvus HW-1 chromosome, complete genomePHB depolymerase family esterase3e-1066.6
NC_007651:3064530:3106841310684131083191479Burkholderia thailandensis E264 chromosome I, complete sequencepoly(3-hydroxybutyrate) depolymerase2e-0757