Pre_GI Gene

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Host: NC_008543 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008543:2871747 Burkholderia cenocepacia HI2424 chromosome 2, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2871747287310513593-carboxy-ciscis-muconate cycloisomeraseQuickGO ontologyBLASTP
287312228739077863-oxoadipate enol-lactonaseQuickGO ontologyBLASTP
287391828743073904-carboxymuconolactone decarboxylaseQuickGO ontologyBLASTP
287450028758581359major facilitator superfamily MFS_1QuickGO ontologyBLASTP
28759902876238249hypothetical proteinBLASTP
28763472876964618Lysine exporter protein LYSEYGGAQuickGO ontologyBLASTP
28777732878039267hypothetical proteinBLASTP
28786122879343732transcriptional regulator CrpFnr familyQuickGO ontologyBLASTP
28798722880144273hypothetical protein
28803202880604285hypothetical proteinBLASTP
288070028817161017Integrase catalytic regionQuickGO ontologyBLASTP
28828562883146291hypothetical proteinBLASTP
28831952883512318hypothetical proteinBLASTP
28836752883935261hypothetical proteinBLASTP
28842072884446240hypothetical proteinBLASTP
28844642884739276hypothetical protein
28851692885681513cold-shock DNA-binding domain proteinQuickGO ontologyBLASTP
28860762886444369translation initiation factor IF-1QuickGO ontologyBLASTP
28865182886802285hypothetical proteinBLASTP
28876242887941318hypothetical protein
28882492888626378hypothetical proteinBLASTP
288896628901561191lysine 23-aminomutase YodO family proteinQuickGO ontologyBLASTP
289020428915651362protein of unknown function DUF201QuickGO ontologyBLASTP
28915942892298705hypothetical proteinBLASTP
289230528935641260major facilitator superfamily MFS_1QuickGO ontologyBLASTP
28938022894581780transcriptional regulator TetR familyQuickGO ontologyBLASTP
289468228963941713monooxygenase FAD-bindingQuickGO ontologyBLASTP
289640228974721071glyoxalasebleomycin resistance proteindioxygenaseQuickGO ontologyBLASTP
28975092898465957fumarylacetoacetate FAA hydrolaseQuickGO ontologyBLASTP
289846229004231962AMP-dependent synthetase and ligaseQuickGO ontologyBLASTP
29005252901250726OmpW family proteinQuickGO ontologyBLASTP