Pre_GI Gene

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Host: NC_008526 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008526:817628 Lactobacillus casei ATCC 334, complete genome

Host Lineage: Lactobacillus casei; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain was isolated from Emmental cheese. Starter culture for milk fermentation and flavor development of cheese. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, fermented milks, and other products, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully created, cultivated, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus casei is used as a starter culture during milk fermentation and for the flavor development of certain bacterial-ripened cheeses.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
817628818272645hypothetical proteinBLASTP
818281819057777Predicted sugar phosphatase of the HAD superfamilyQuickGO ontologyBLASTP
819063819686624Predicted membrane proteinQuickGO ontologyBLASTP
81968781975872hypothetical protein
819774820427654Uncharacterized membrane-associated proteinQuickGO ontologyBLASTP
820513821016504Phosphatidylglycerophosphatase A related proteinQuickGO ontologyBLASTP
821055822041987Thioredoxin reductaseQuickGO ontologyBLASTP
822265822849585Peptidyl-prolyl cis-trans isomerase rotamase - cyclophilin familyQuickGO ontologyBLASTP
822913823296384RNA binding protein S1 domainQuickGO ontologyBLASTP
823779825346156816S ribosomal RNAQuickGO ontologyBLASTP
825967828481251523S ribosomal RNAQuickGO ontologyBLASTP
8286818287821025S ribosomal RNAQuickGO ontologyBLASTP
82880382887573tRNA-ValQuickGO ontologyBLASTP
82887882895073tRNA-LysQuickGO ontologyBLASTP
82899282906473tRNA-ThrQuickGO ontologyBLASTP
82909882916972tRNA-GlyQuickGO ontology
82923082930374tRNA-ArgQuickGO ontologyBLASTP
82930882938174tRNA-ProQuickGO ontology
82940882948174tRNA-MetQuickGO ontology
82949082956374tRNA-MetQuickGO ontologyBLASTP
82961282968574tRNA-MetQuickGO ontology
82969382976674tRNA-AspQuickGO ontologyBLASTP
82977282984473tRNA-PheQuickGO ontology
82986482993471tRNA-GlyQuickGO ontologyBLASTP
82994983002274tRNA-IleQuickGO ontology
83005283013988tRNA-SerQuickGO ontologyBLASTP
83014483021572tRNA-GluQuickGO ontologyBLASTP
83022583031692tRNA-SerQuickGO ontologyBLASTP
83032783040074tRNA-MetQuickGO ontology
83040883048174tRNA-AspQuickGO ontologyBLASTP
83052583059773tRNA-PheQuickGO ontology
83060283068281tRNA-TyrQuickGO ontologyBLASTP
83068983075971tRNA-TrpQuickGO ontologyBLASTP
83077183084373tRNA-HisQuickGO ontologyBLASTP
83085283092372tRNA-GlnQuickGO ontology
83096683103671tRNA-CysQuickGO ontology
83108383116987tRNA-LeuQuickGO ontology
831483831836354TransposaseQuickGO ontologyBLASTP
8319378334391503TransposaseQuickGO ontologyBLASTP
833749834297549ComXQuickGO ontologyBLASTP
8346748363921719BLASTP