Pre_GI Gene

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Host: NC_008390 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008390:2156188 Burkholderia cepacia AMMD chromosome 1, complete sequence

Host Lineage: Burkholderia ambifaria; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Isolated from the rhizosphere of healthy pea plants in Wisconsin, USA, in 1985. Pathogenic in cystic fibrosis patients. These bacteria present great versatility to adapt to diverse environments, and are capable of degrading pollutants in water and soil, and fixing atmospheric nitrogen. This species include strains isolated from cystic fibrosis patients as well as strains with potential use in biocontrol.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
21561882156958771transcriptional regulator GntR familyQuickGO ontologyBLASTP
215695521586941740fumarate reductasesuccinate dehydrogenase flavoprotein domain proteinQuickGO ontologyBLASTP
215870621589512464Fe-4S ferredoxin iron-sulfur binding domain proteinQuickGO ontologyBLASTP
21590982160093996PBS lyase HEAT domain protein repeat-containing proteinQuickGO ontologyBLASTP
21600902160410321hypothetical proteinBLASTP
21608282161415588hypothetical protein
21615852162127543Exonuclease RNase T and DNA polymerase IIIQuickGO ontologyBLASTP
216212421632871164hypothetical proteinBLASTP
21632872164183897AAA ATPase central domain proteinQuickGO ontologyBLASTP
21641832164674492hypothetical proteinBLASTP
21646712165621951hypothetical proteinBLASTP
216569021679062217hypothetical proteinBLASTP
216790321690751173AAA ATPase central domain proteinQuickGO ontologyBLASTP
21694802170289810hypothetical proteinBLASTP
21709132171737825protein of unknown function DUF932QuickGO ontologyBLASTP
217209921735381440pyridine nucleotide-disulphide oxidoreductase dimerisation regionQuickGO ontologyBLASTP
21736442174003360Thioredoxin domainQuickGO ontologyBLASTP
21740682174397330thioredoxinQuickGO ontologyBLASTP
217444021755611122NADHflavin oxidoreductaseNADH oxidaseQuickGO ontologyBLASTP
21756392176199561OsmC family proteinQuickGO ontologyBLASTP
21763022176976675DSBA oxidoreductaseQuickGO ontologyBLASTP
21770832177646564transcriptional regulator TetR familyQuickGO ontologyBLASTP
21777412178082342alkylhydroperoxidase like protein AhpD familyQuickGO ontologyBLASTP
21781112178905795short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
21802562181074819hypothetical proteinBLASTP
21811492181433285hypothetical proteinBLASTP
21814602182293834conserved hypothetical replication initiator and transcription repressor proteinQuickGO ontologyBLASTP