Pre_GI Gene

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Host: NC_008278 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008278:6885254 Frankia alni ACN14a, complete genome

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
688525468896694416hypothetical protein Putative conjugal transfer protein traAQuickGO ontologyBLASTP
68897876889999213hypothetical proteinBLASTP
689071568917581044hypothetical protein
68907516891575825hypothetical protein
6891907689200599hypothetical protein
68925786892946369hypothetical protein putative signal peptideQuickGO ontology
689294368965633621hypothetical protein putative WD-repeat proteinQuickGO ontologyBLASTP
689692768982011275hypothetical proteinBLASTP
68982046899172969Putative protein putative signal peptide putative O-methyltransferaseQuickGO ontologyBLASTP
689915469003111158hypothetical proteinBLASTP
690033569034633129hypothetical proteinBLASTP
69035216903712192hypothetical proteinBLASTP
690377169050181248Putative Protein putative O-methyltransferaseQuickGO ontologyBLASTP
69051616905994834Putative protein Putative regulatory proteinQuickGO ontologyBLASTP
69060246906587564hypothetical proteinBLASTP
69065776906783207hypothetical proteinBLASTP
69068206907083264hypothetical protein
69070916907285195Putative regulatorQuickGO ontologyBLASTP
69072926908092801putative DNA-binding proteinQuickGO ontologyBLASTP
69085526909253702Putative regulatorQuickGO ontologyBLASTP
69092506909735486hypothetical proteinBLASTP
69098156910189375hypothetical proteinBLASTP
691034369116831341putative Tyrosine recombinase xerDQuickGO ontologyBLASTP
69120636912236174hypothetical proteinBLASTP
691248769137821296Putative integral membrane protein partial matchQuickGO ontologyBLASTP
69144436915117675putative two-component system response regulatorQuickGO ontologyBLASTP
691511069165071398hypothetical protein putative signal peptideQuickGO ontologyBLASTP
69164556916904450hypothetical proteinBLASTP
691770469189301227Succinate-semialdehyde dehydrogenase NADP SSDHQuickGO ontologyBLASTP
69189976919866870hypothetical proteinBLASTP
69202796920467189hypothetical protein
69207086921592885hypothetical proteinBLASTP
69216636922244582hypothetical proteinBLASTP
69222666922559294hypothetical protein
69226226923185564Putative TetR-family transcriptional regulatorQuickGO ontologyBLASTP
692347569246891215Hypothetical protein putative penicillin binding proteinQuickGO ontologyBLASTP
69249886925872885Pantoate-beta-alanine ligase Pantothenate synthetase Pantoate activating enzymeQuickGO ontologyBLASTP
692586969272781410putative aldehyde dehydrogenaseQuickGO ontologyBLASTP
69273696928184816hypothetical protein
692818169294641284hypothetical proteinBLASTP
692946169308551395hypothetical protein putative Sensor histidine kinaseQuickGO ontology
693086469318681005putative D-3-phosphoglycerate dehydrogenase PGDHQuickGO ontologyBLASTP