Pre_GI: BLASTN Hits

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Query: NC_008278:6885254 Frankia alni ACN14a, complete genome

Start: 6885254, End: 6931868, Length: 46615

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009921:51034510347645625423Frankia sp. EAN1pec, complete genome0688BLASTN svgBLASTP svg
NC_008278:14727091472709149653023822Frankia alni ACN14a, complete genome3e-94355BLASTN svgBLASTP svg
NC_014666:84597248459724848362923906Frankia sp. EuI1c chromosome, complete genome4e-19105BLASTN svgBLASTP svg
NC_007777:12960001296000131759921600Frankia sp. CcI3, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_008278:6854759*6854759688205327295Frankia alni ACN14a, complete genome2e-1593.7BLASTN svgBLASTP svg
NC_008699:16731811673181172409950919Nocardioides sp. JS614, complete genome6e-1591.7BLASTN svgBLASTP svg
NC_009921:16111321611132163853427403Frankia sp. EAN1pec, complete genome6e-1281.8BLASTN svgBLASTP svg
NC_014217:45505444550544458915738614Starkeya novella DSM 506 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_013131:10322152*103221521035840336252Catenulispora acidiphila DSM 44928, complete genome9e-1177.8BLASTN svgBLASTP svg
NC_008278:29336902933690295659922910Frankia alni ACN14a, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_013131:44734104473410449211718708Catenulispora acidiphila DSM 44928, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_015656:632960*63296066311030151Frankia symbiont of Datisca glomerata chromosome, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_013205:2610956*2610956266117350218Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,5e-0661.9BLASTN svgBLASTP svg
NC_009921:1668306*1668306172598657681Frankia sp. EAN1pec, complete genome5e-0661.9BLASTN svgBLASTP svg