Pre_GI Gene

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Host: NC_008278 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008278:5012000 Frankia alni ACN14a, complete genome

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
50121755012891717conserved hypothetical protein putative Thioesterase and Phenylacetic acid degradation domainsQuickGO ontologyBLASTP
501338450145561173putative branched chain amino acid binding protein precursorQuickGO ontologyBLASTP
50146355014901267hypothetical protein
501482050165261707Putative branched-chain amino acid ABC transporter perisplasmic amino acid-binding proteinQuickGO ontologyBLASTP
50168075017406600Two-component system transcriptional regulatorQuickGO ontologyBLASTP
50175565017882327hypothetical protein
5017631501770373tRNA-LeuQuickGO ontology
501781950198612043Putative transposaseQuickGO ontologyBLASTP
50198105020025216hypothetical protein
50204455020798354hypothetical protein
50211035021324222hypothetical protein
50215745021831258hypothetical protein
50223495022630282hypothetical protein
50227795023441663conserved hypothetical protein present in several antibiotic biosynthetic clustersQuickGO ontologyBLASTP
50237325024103372Putative IS transposase partial matchQuickGO ontologyBLASTP
50241705025159990Conserved hypothetical protein putative Site-specific recombinase phage integrase family proteinQuickGO ontologyBLASTP
50256295025883255hypothetical proteinBLASTP
50259035026388486hypothetical protein partial match putative conserved transposase IS4 domainQuickGO ontologyBLASTP
50266045026795192hypothetical protein
50268635027609747putative oxidoreductase short-chain type dehydrogenasereductaseQuickGO ontologyBLASTP
502770250292071506putative halogenaseQuickGO ontologyBLASTP
50293835029703321hypothetical protein
502967350313041632putative secreted FAD-linked oxidaseQuickGO ontologyBLASTP
50318485032351504hypothetical protein putative cupin domainQuickGO ontologyBLASTP
50323445032949606conserved hypothetical protein putative GlyoxalaseBleomycin resistance proteindioxygenase domainQuickGO ontologyBLASTP
5032946503449315482-epi-5-epi-valiolone synthase partial matchQuickGO ontologyBLASTP
503460750358691263L-alanineN-amidino-3-keto-scyllo-inosamine aminotransferaseQuickGO ontologyBLASTP
503589650374041509putative Pyranose oxidase precursor Glucose 2-oxidaseQuickGO ontologyBLASTP
50374415037788348conserved hypothetical protein putative RmlC-like cupin domainQuickGO ontologyBLASTP
50378245038537714conserved hypothetical protein putative cupin domainQuickGO ontologyBLASTP
50385305038910381hypothetical proteinBLASTP
50389425039214273hypothetical proteinBLASTP
50392695039532264conserved hypothetical protein putative cupin domainQuickGO ontologyBLASTP
50397025039962261hypothetical protein putative Phosphopantetheine-binding domainQuickGO ontologyBLASTP
50398595041592173423-dihydroxybenzoyladenylate synthase 2 3-dihydroxybenzoate-AMP ligase Dihydroxybenzoic acid-activating enzymeQuickGO ontologyBLASTP
504159450426371044Putative 3-oxoacyl-acyl-carrier-protein synthaseQuickGO ontologyBLASTP
504263450439711338Anthranilate synthase component IQuickGO ontologyBLASTP
50442445044459216hypothetical protein
50446715044967297Putative transposase partialQuickGO ontologyBLASTP
50451985045635438Putative transposase partialQuickGO ontologyBLASTP
50457945046024231hypothetical proteinBLASTP
504636850475911224hypothetical protein putative Glutathione synthetase ATP-binding domainQuickGO ontologyBLASTP
504765350490711419hypothetical protein putative Glutathione synthetase ATP-binding domainQuickGO ontologyBLASTP
504906850502521185succinyl-diaminopimelate desuccinylase likeQuickGO ontologyBLASTP
505032350516691347Putative antibiotic transport proteinQuickGO ontologyBLASTP
50517955052451657putative Dimethylmenaquinone methyltransferaseQuickGO ontologyBLASTP