Query: NC_008278:5012000 Frankia alni ACN14a, complete genome
Start: 5012000, End: 5052451, Length: 40452
Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_015656:2484749* | 2484749 | 2515484 | 30736 | Frankia symbiont of Datisca glomerata chromosome, complete genome | 2e-172 | 615 | BLASTN svg | BLASTP svg |
NC_009921:522000 | 522000 | 562102 | 40103 | Frankia sp. EAN1pec, complete genome | 5e-114 | 420 | BLASTN svg | BLASTP svg |
NC_019673:6394319 | 6394319 | 6461357 | 67039 | Saccharothrix espanaensis DSM 44229 complete genome | 2e-100 | 375 | BLASTN svg | BLASTP svg |
NC_007777:1296000 | 1296000 | 1317599 | 21600 | Frankia sp. CcI3, complete genome | 8e-85 | 323 | BLASTN svg | BLASTP svg |
NC_009921:5202607* | 5202607 | 5244099 | 41493 | Frankia sp. EAN1pec, complete genome | 4e-31 | 145 | BLASTN svg | BLASTP svg |
NC_019673:2051363 | 2051363 | 2140916 | 89554 | Saccharothrix espanaensis DSM 44229 complete genome | 2e-30 | 143 | BLASTN svg | BLASTP svg |
NC_009921:8215996* | 8215996 | 8259099 | 43104 | Frankia sp. EAN1pec, complete genome | 6e-30 | 141 | BLASTN svg | BLASTP svg |
NC_007777:2543475 | 2543475 | 2565186 | 21712 | Frankia sp. CcI3, complete genome | 1e-28 | 137 | BLASTN svg | BLASTP svg |
NC_003155:7453994 | 7453994 | 7481642 | 27649 | Streptomyces avermitilis MA-4680, complete genome | 2e-24 | 123 | BLASTN svg | BLASTP svg |
NC_007777:3000941 | 3000941 | 3028099 | 27159 | Frankia sp. CcI3, complete genome | 9e-23 | 117 | BLASTN svg | BLASTP svg |
NC_003155:4592000 | 4592000 | 4636144 | 44145 | Streptomyces avermitilis MA-4680, complete genome | 6e-18 | 101 | BLASTN svg | BLASTP svg |
NC_003155:365500 | 365500 | 385099 | 19600 | Streptomyces avermitilis MA-4680, complete genome | 2e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_003155:320979 | 320979 | 339185 | 18207 | Streptomyces avermitilis MA-4680, complete genome | 2e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_014210:3763940* | 3763940 | 3791099 | 27160 | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome, | 1e-15 | 93.7 | BLASTN svg | BLASTP svg |
NC_009921:3473854* | 3473854 | 3529599 | 55746 | Frankia sp. EAN1pec, complete genome | 2e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_009664:4423829* | 4423829 | 4686013 | 262185 | Kineococcus radiotolerans SRS30216, complete genome | 8e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_021177:1736854 | 1736854 | 1776599 | 39746 | Streptomyces fulvissimus DSM 40593, complete genome | 3e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_008269:1067082 | 1067082 | 1090099 | 23018 | Rhodococcus sp. RHA1 plasmid pRHL1, complete sequence | 3e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_015957:196000 | 196000 | 217780 | 21781 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 1e-12 | 83.8 | BLASTN svg | BLASTP svg |
NC_010572:6463939* | 6463939 | 6494688 | 30750 | Streptomyces griseus subsp. griseus NBRC 13350, complete genome | 5e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_009921:565947* | 565947 | 585370 | 19424 | Frankia sp. EAN1pec, complete genome | 5e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_015656:4850833 | 4850833 | 4871241 | 20409 | Frankia symbiont of Datisca glomerata chromosome, complete genome | 2e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_011886:1891077* | 1891077 | 1924599 | 33523 | Arthrobacter chlorophenolicus A6, complete genome | 8e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_013235:1761539 | 1761539 | 1780599 | 19061 | Nakamurella multipartita DSM 44233, complete genome | 3e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_009921:5331565 | 5331565 | 5353745 | 22181 | Frankia sp. EAN1pec, complete genome | 3e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_009921:1668306* | 1668306 | 1725986 | 57681 | Frankia sp. EAN1pec, complete genome | 3e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_008278:613329 | 613329 | 634954 | 21626 | Frankia alni ACN14a, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
NC_014158:2561441* | 2561441 | 2585255 | 23815 | Tsukamurella paurometabola DSM 20162 chromosome, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
NC_015953:1581542* | 1581542 | 1606508 | 24967 | Streptomyces sp. SirexAA-E chromosome, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
NC_018531:1900619* | 1900619 | 1941817 | 41199 | Arthrobacter sp. Rue61a chromosome, complete genome | 5e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_007777:2186000* | 2186000 | 2208209 | 22210 | Frankia sp. CcI3, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_008786:2729635 | 2729635 | 2771343 | 41709 | Verminephrobacter eiseniae EF01-2, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_014391:1910273 | 1910273 | 1964098 | 53826 | Micromonospora aurantiaca ATCC 27029 chromosome, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_013510:3324978* | 3324978 | 3347835 | 22858 | Thermomonospora curvata DSM 43183, complete genome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_009921:5275694 | 5275694 | 5305099 | 29406 | Frankia sp. EAN1pec, complete genome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_009921:3666898 | 3666898 | 3740718 | 73821 | Frankia sp. EAN1pec, complete genome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |