Pre_GI: BLASTN Hits

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Query: NC_008278:5012000 Frankia alni ACN14a, complete genome

Start: 5012000, End: 5052451, Length: 40452

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015656:2484749*2484749251548430736Frankia symbiont of Datisca glomerata chromosome, complete genome2e-172615BLASTN svgBLASTP svg
NC_009921:52200052200056210240103Frankia sp. EAN1pec, complete genome5e-114420BLASTN svgBLASTP svg
NC_019673:63943196394319646135767039Saccharothrix espanaensis DSM 44229 complete genome2e-100375BLASTN svgBLASTP svg
NC_007777:12960001296000131759921600Frankia sp. CcI3, complete genome8e-85323BLASTN svgBLASTP svg
NC_009921:5202607*5202607524409941493Frankia sp. EAN1pec, complete genome4e-31145BLASTN svgBLASTP svg
NC_019673:20513632051363214091689554Saccharothrix espanaensis DSM 44229 complete genome2e-30143BLASTN svgBLASTP svg
NC_009921:8215996*8215996825909943104Frankia sp. EAN1pec, complete genome6e-30141BLASTN svgBLASTP svg
NC_007777:25434752543475256518621712Frankia sp. CcI3, complete genome1e-28137BLASTN svgBLASTP svg
NC_003155:74539947453994748164227649Streptomyces avermitilis MA-4680, complete genome2e-24123BLASTN svgBLASTP svg
NC_007777:30009413000941302809927159Frankia sp. CcI3, complete genome9e-23117BLASTN svgBLASTP svg
NC_003155:45920004592000463614444145Streptomyces avermitilis MA-4680, complete genome6e-18101BLASTN svgBLASTP svg
NC_003155:36550036550038509919600Streptomyces avermitilis MA-4680, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_003155:32097932097933918518207Streptomyces avermitilis MA-4680, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_014210:3763940*3763940379109927160Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,1e-1593.7BLASTN svgBLASTP svg
NC_009921:3473854*3473854352959955746Frankia sp. EAN1pec, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_009664:4423829*44238294686013262185Kineococcus radiotolerans SRS30216, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_021177:17368541736854177659939746Streptomyces fulvissimus DSM 40593, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_008269:10670821067082109009923018Rhodococcus sp. RHA1 plasmid pRHL1, complete sequence3e-1385.7BLASTN svgBLASTP svg
NC_015957:19600019600021778021781Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_010572:6463939*6463939649468830750Streptomyces griseus subsp. griseus NBRC 13350, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_009921:565947*56594758537019424Frankia sp. EAN1pec, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_015656:48508334850833487124120409Frankia symbiont of Datisca glomerata chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_011886:1891077*1891077192459933523Arthrobacter chlorophenolicus A6, complete genome8e-1177.8BLASTN svgBLASTP svg
NC_013235:17615391761539178059919061Nakamurella multipartita DSM 44233, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_009921:53315655331565535374522181Frankia sp. EAN1pec, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_009921:1668306*1668306172598657681Frankia sp. EAN1pec, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_008278:61332961332963495421626Frankia alni ACN14a, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_014158:2561441*2561441258525523815Tsukamurella paurometabola DSM 20162 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_015953:1581542*1581542160650824967Streptomyces sp. SirexAA-E chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_018531:1900619*1900619194181741199Arthrobacter sp. Rue61a chromosome, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_007777:2186000*2186000220820922210Frankia sp. CcI3, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_008786:27296352729635277134341709Verminephrobacter eiseniae EF01-2, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_014391:19102731910273196409853826Micromonospora aurantiaca ATCC 27029 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_013510:3324978*3324978334783522858Thermomonospora curvata DSM 43183, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_009921:52756945275694530509929406Frankia sp. EAN1pec, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_009921:36668983666898374071873821Frankia sp. EAN1pec, complete genome5e-0661.9BLASTN svgBLASTP svg