Pre_GI Gene

Some Help

Host: NC_008278 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008278:2813362 Frankia alni ACN14a, complete genome

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
281336228167213360putative non ribosomal peptide synthetaseQuickGO ontologyBLASTP
281678028183601581putative polyketide oxygenasehydroxylaseQuickGO ontologyBLASTP
281865528199861332peptide monooxygenaseQuickGO ontologyBLASTP
28201062820948843hypothetical proteinBLASTP
28211862821983798hypothetical proteinBLASTP
28220422822899858hypothetical proteinBLASTP
28229142823243330Putative PadR family transcriptional regulatorQuickGO ontologyBLASTP
28233592823568210hypothetical protein
28235752824051477Putative cyclohexadienyl dehydrogenaseQuickGO ontologyBLASTP
28241142824506393hypothetical proteinBLASTP
28243342824699366hypothetical protein
28247002824978279hypothetical protein
28251352825572438putative site-specific recombinaseQuickGO ontologyBLASTP
28258512826702852hypothetical protein putative signal peptideQuickGO ontology
28271302827387258hypothetical protein
28274282827784357BLASTP
28277092827891183
28278612828025165
282822728295671341Putative Glycosyl transferaseQuickGO ontologyBLASTP
28297492830459711hypothetical proteinBLASTP
28305322831158627Putative UDP glucose epimerase partialQuickGO ontologyBLASTP
283143328325781146hypothetical protein Putative molybdenum cofactor biosynthesis proteinQuickGO ontologyBLASTP
28330512833230180hypothetical protein
283340828350151608Putative multi-domain beta keto-acyl synthaseQuickGO ontologyBLASTP
28350122835803792hypothetical protein putative signal peptideQuickGO ontology
283618328372711089hypothetical proteinBLASTP
28372682838122855hypothetical proteinBLASTP
28383112839033723putative Two-compnent system regulatory protein two-component system response regulatorQuickGO ontologyBLASTP
28390822839456375hypothetical proteinBLASTP
28394262839719294Dehydrogenase Oxidoreductase short-chain dehydrogenasereductase familyQuickGO ontologyBLASTP
284011528413501236Putative epoxide hydrolaseQuickGO ontologyBLASTP
28413472841574228Short chain dehydrogenase partialQuickGO ontology
28416022841877276hypothetical protein
28420262842664639Putative bacterial regulatory protein MarR partialQuickGO ontologyBLASTP
28425312842839309putative transposase fragmentQuickGO ontologyBLASTP
28427762843120345Putative tetR-family regulatory proteinQuickGO ontology
284325228458732622ATP-dependent protease Hsp 100 part of multi-chaperone system with DnaK DnaJ and GrpEQuickGO ontologyBLASTP
28458702846193324hypothetical proteinBLASTP
28461902847164975curved DNA-binding protein co-chaperone of DnaK Hsp40 familyQuickGO ontologyBLASTP
28471662847846681Hsp 24 nucleotide exchange factorQuickGO ontologyBLASTP
284777328495661794chaperone Hsp70 in DNA biosynthesiscell divisionQuickGO ontologyBLASTP
28499042850374471hypothetical proteinBLASTP
28508452851279435hypothetical proteinBLASTP
28513322851688357hypothetical proteinBLASTP
28518312851971141hypothetical protein
285200028540242025putative thioredoxin reductaseQuickGO ontologyBLASTP
28540212854314294hypothetical protein