Pre_GI Gene

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Host: NC_008268 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008268:7180663 Rhodococcus sp. RHA1, complete genome

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
718066371823691707possible helicaseQuickGO ontologyBLASTP
71823797182657279hypothetical protein
71830197183858840hypothetical proteinBLASTP
71843937184866474possible permeaseQuickGO ontology
71855417185975435hypothetical protein
71859817186478498hypothetical protein
71864817187458978possible oxidoreductaseQuickGO ontologyBLASTP
71874807188436957hypothetical protein
71884397188723285hypothetical protein
71889977189293297hypothetical protein
718949571909641470aldehyde dehydrogenase NADQuickGO ontologyBLASTP
719107071926861617cyclohexanone monooxygenaseQuickGO ontologyBLASTP
71927327193637906hydrolaseQuickGO ontologyBLASTP
71938107194610801probable enoyl-CoA hydrataseQuickGO ontologyBLASTP
719472271957501029possible acyl-CoA dehydrogenaseQuickGO ontologyBLASTP
719575071968471098probable acyl-CoA dehydrogenaseQuickGO ontologyBLASTP
71969107197473564possible acyl-CoA transferasescarnitine dehydratase C-terminalQuickGO ontologyBLASTP
71975017197986486possible acyl-CoA transferasescarnitine dehydratase N-terminalQuickGO ontologyBLASTP
71981397198894756probable transciptional regulator IclR familyQuickGO ontologyBLASTP
71989197199851933possible esteraseQuickGO ontologyBLASTP
72000637200803741possible hydrolaseQuickGO ontologyBLASTP
72008787201180303hypothetical proteinBLASTP
72012547202180927NADH pyrophosphataseQuickGO ontologyBLASTP
720222172040471827possible transcriptional regulatorQuickGO ontologyBLASTP
720413872057841647probable acyl-CoA synthetasesQuickGO ontologyBLASTP
720604472069439005-valerolactone hydrolaseQuickGO ontologyBLASTP
72070267208012987possible 2-nitropropane dioxygenaseQuickGO ontologyBLASTP
72080097208917909probable enoyl-CoA hydrataseQuickGO ontologyBLASTP
72089977209509513hypothetical protein
72094807209962483acyl-CoA dehydrogenaseQuickGO ontologyBLASTP
721027372119101638cyclohexanone monooxygenaseQuickGO ontologyBLASTP
72119647212503540hypothetical protein
72127087213157450hypothetical proteinBLASTP
72131627214145984thioredoxin reductaseQuickGO ontologyBLASTP
72148647215130267hypothetical proteinBLASTP
72151277215579453probable thioredoxinQuickGO ontologyBLASTP
72155947215836243possible ClpAQuickGO ontologyBLASTP
721585872182272370ATP-binding subunit of heat shock protein ClpBQuickGO ontologyBLASTP
72182097218538330hypothetical proteinBLASTP
72185357219461927chaperone proteinQuickGO ontologyBLASTP
72194687219992525heat shock protein GrpEQuickGO ontologyBLASTP
722000172218811881heat shock protein Hsp70QuickGO ontologyBLASTP