Pre_GI Gene

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Host: NC_008268 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008268:5745620 Rhodococcus sp. RHA1, complete genome

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
574562057475781959monooxygenaseQuickGO ontologyBLASTP
574764257508243183carboxylase CoA carboxylaseQuickGO ontologyBLASTP
57508215751447627possible monooxygenaseQuickGO ontologyBLASTP
57516905752199510hypothetical protein
57523275752809483hypothetical proteinBLASTP
57528065753669864enoyl-CoA hydrataseQuickGO ontologyBLASTP
57536835754459777possible enoyl-CoA hydrataseQuickGO ontologyBLASTP
57546435755419777short chain dehydrogenaseQuickGO ontologyBLASTP
57554805756157678transcriptional regulator TetR familyQuickGO ontologyBLASTP
575630457574701167possible monooxygenaseQuickGO ontologyBLASTP
57575015757758258hypothetical protein
575788457595421659ligaseQuickGO ontologyBLASTP
57595815760207627hypothetical proteinBLASTP
576027157617161446riboflavin biosynthesis proteinQuickGO ontologyBLASTP
576183057645022673possible transcriptional regulator LuxR familyQuickGO ontologyBLASTP
57647345765135402hypothetical proteinBLASTP
576519657663111116monooxygenaseQuickGO ontologyBLASTP
576633857670877503-oxoacyl-acyl-carrier-protein reductaseQuickGO ontologyBLASTP