Pre_GI: BLASTP Hits

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Query: NC_008268:5745620:5755480 Rhodococcus sp. RHA1, complete genome

Start: 5755480, End: 5756157, Length: 678

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007953:314872:334745334745335404660Burkholderia xenovorans LB400 chromosome 3, complete sequenceTranscriptional regulator, TetR family2e-57221
NC_007794:1504449:151167815116781512337660Novosphingobium aromaticivorans DSM 12444, complete genometranscriptional regulator, TetR family3e-44178
NC_017904:2724941:272761627276162728188573Mycobacterium sp. MOTT36Y chromosome, complete genomeTetR family transcriptional regulator3e-1788.6
NC_018524:1279156:129739812973981297970573Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeputative transcriptional regulator3e-1685.1
NC_010612:6113155:612666161266616127263603Mycobacterium marinum M, complete genometranscriptional regulatory protein (probably TetR-family)2e-1479.3
NC_017904:1725180:174104217410421741812771Mycobacterium sp. MOTT36Y chromosome, complete genomeTetR family transcriptional regulator5e-1477.8
NC_013385:1064188:107194410719441072534591Ammonifex degensii KC4, complete genometranscriptional regulator, TetR family8e-1477
NC_015563:2656628:268139926813992682013615Delftia sp. Cs1-4 chromosome, complete genomeregulatory protein TetR2e-1376.3
NC_008699:2916752:293651429365142937146633Nocardioides sp. JS614, complete genomeregulatory protein, TetR4e-1375.1
NC_016023:1083826:110000311000031100566564Bacillus coagulans 36D1 chromosome, complete genomeTetR family transcriptional regulator3e-1375.1
NC_020133:5710661:572194157219415722498558Mycobacterium liflandii 128FXT, complete genomeTetR family transcriptional regulator1e-1273.6
NC_008825:1113060:111747611174761118156681Methylibium petroleiphilum PM1, complete genomeputative transcription regulator protein4e-1271.6
NC_006361:498305:504157504157504795639Nocardia farcinica IFM 10152, complete genomeputative transcriptional regulator6e-1270.9
NC_011000:1262324:126468212646821265407726Burkholderia cenocepacia J2315 chromosome 1, complete sequenceTetR family regulatory protein8e-1270.9
NC_014830:3438504:347522834752283475842615Intrasporangium calvum DSM 43043 chromosome, complete genometranscriptional regulator, TetR family2e-1168.9
NC_020302:3014483:304061930406193041248630Corynebacterium halotolerans YIM 70093 = DSM 44683, completetranscriptional regulator6e-1167.8
NC_010623:1871492:188609818860981886784687Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, TetR family7e-1167.4
NC_003869:74836:778127781278402591Thermoanaerobacter tengcongensis MB4, complete genomeTranscriptional regulator1e-1066.6
NC_009921:3666898:373621137362113736819609Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family1e-1066.6
NC_008740:443274:492649492649493263615Marinobacter aquaeolei VT8, complete genometranscriptional regulator, TetR family2e-1066.2
NC_009848:3582384:359831935983193598969651Bacillus pumilus SAFR-032, complete genomeTetR family transcriptional regulator2e-1066.2
NC_015172:2986867:302742730274273028068642Syntrophobotulus glycolicus DSM 8271 chromosome, complete genometranscriptional regulator, TetR family2e-1065.5
NC_014814:1425500:142553014255301426126597Mycobacterium sp. Spyr1 chromosome, complete genometranscriptional regulator, TetR family3e-1065.1
NC_014834:2264108:229729222972922298074783Rhodopseudomonas palustris DX-1 chromosome, complete genomeTetR family transcriptional regulator5e-1064.7
NC_016947:666627:687288687288687869582Mycobacterium intracellulare MOTT-02 chromosome, complete genomeTetR family transcriptional regulator5e-1064.7
NC_014831:1818968:182454118245411825230690Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional regulator, TetR family7e-1064.3
NC_009077:4810379:481319748131974813793597Mycobacterium sp. JLS, complete genometranscriptional regulator, TetR family1e-0963.5
NC_010552:2331486:234899723489972349671675Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetranscriptional regulator, TetR family9e-1063.5
NC_011894:3475775:348365834836583484347690Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, TetR family1e-0963.2
NC_008600:2353696:236310023631002363594495Bacillus thuringiensis str. Al Hakam, complete genometranscriptional regulator, TetR family2e-0962.8
NC_010515:2037825:203968620396862040360675Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, TetR family4e-0961.6
NC_015563:4383000:440362344036234404303681Delftia sp. Cs1-4 chromosome, complete genomeTetracycline transcriptional regulator YcdC domain-containing protein5e-0961.2
NC_008278:2732890:274044927404492741114666Frankia alni ACN14a, complete genomehypothetical protein7e-0960.8
NC_018691:2254566:226531422653142265982669Alcanivorax dieselolei B5 chromosome, complete genomeTranscriptional regulator1e-0860.5
NC_014831:1843835:186181618618161862391576Thermaerobacter marianensis DSM 12885 chromosome, complete genomeregulatory protein TetR9e-0960.5
NC_008786:18688:243492434924993645Verminephrobacter eiseniae EF01-2, complete genometranscriptional regulator, TetR family9e-0960.5
NC_008699:833737:853126853126853728603Nocardioides sp. JS614, complete genomeregulatory protein, TetR9e-0960.5
NC_013929:2583849:258533825853382585931594Streptomyces scabiei 87.22 chromosome, complete genomeTetR family transcriptional regulator1e-0860.1
NC_016147:1788219:180650518065051807080576Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeTetR family transcriptional regulator1e-0860.1
NC_014758:310394:344457344457345041585Calditerrivibrio nitroreducens DSM 19672 chromosome, completetranscriptional regulator, tetr family1e-0859.7
NC_014624:1369642:138879613887961389392597Eubacterium limosum KIST612 chromosome, complete genometranscriptional regulator2e-0859.3
NC_015958:84270:861788617886756579Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeTetR family transcriptional regulator3e-0858.9
NC_009633:337706:353145353145353717573Alkaliphilus metalliredigens QYMF chromosome, complete genomeTetR family transcriptional regulator3e-0858.9
NC_015593:158107:183024183024183683660Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeTetR family transcriptional regulator3e-0858.9
NC_014363:232385:263666263666264268603Olsenella uli DSM 7084 chromosome, complete genometranscriptional regulator, TetR family3e-0858.9
NC_014209:81643:119504119504120079576Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,transcriptional regulator, TetR family2e-0858.9
NC_019673:1988853:199991619999162000491576Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, TetR family3e-0858.5
NC_011979:773673:796097796097796687591Geobacter sp. FRC-32, complete genometranscriptional regulator, TetR family4e-0858.5
NC_007348:2519447:253859825385982539335738Ralstonia eutropha JMP134 chromosome 2, complete sequenceregulatory protein, TetR6e-0857.8
NC_017075:1674758:169781216978121698459648Rubrivivax gelatinosus IL144, complete genomeTetR family transcriptional regulator7e-0857.4
NC_009921:3666898:370507837050783705695618Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family8e-0857.4
NC_010545:2025000:203269620326962033367672Corynebacterium urealyticum DSM 7109, complete genomeputative transcriptional regulator (TetR family)9e-0857
NC_016002:2453919:247043024704302471047618Pseudogulbenkiania sp. NH8B, complete genomeTetR family transcriptional regulator1e-0756.6
NC_004193:701622:715262715262715828567Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator1e-0756.6
NC_006177:1060428:107883110788311079454624Symbiobacterium thermophilum IAM 14863, complete genomeTetR family transcriptional regulator1e-0756.6
NC_010694:1966676:196889219688921969524633Erwinia tasmaniensis, complete genomeTetR-family transcriptional regulator2e-0756.2
NC_014335:2274774:227990022799002280316417Bacillus cereus biovar anthracis str. CI chromosome, completeTetR family transcriptional regulator2e-0756.2
NC_015580:1328361:132836113283611329092732Novosphingobium sp. PP1Y, complete genomeTetR family transcriptional regulator2e-0756.2
NC_008699:2294361:231661123166112317240630Nocardioides sp. JS614, complete genomeregulatory protein, TetR2e-0755.8
NC_015563:3203012:321023432102343210932699Delftia sp. Cs1-4 chromosome, complete genomeTetR family transcriptional regulator2e-0755.8
NC_014500:2402881:242317224231722423798627Dickeya dadantii 3937 chromosome, complete genomeputative DNA-binding transcriptional regulatory family of the TetR family2e-0755.8
NC_012912:2426520:243471224347122435335624Dickeya zeae Ech1591, complete genometranscriptional regulator, TetR family2e-0755.8
NC_013209:2759160:277140327714032772044642Acetobacter pasteurianus IFO 3283-01, complete genometranscriptional regulator TetR2e-0755.8
NC_000916:952663:968930968930969556627Methanothermobacter thermautotrophicus str. Delta H, completetranscriptional regulator related protein3e-0755.5
NC_013406:5066769:508499650849965085649654Paenibacillus sp. Y412MC10 chromosome, complete genomeTetR family transcriptional regulator3e-0755.5
NC_011000:1262324:129188312918831292545663Burkholderia cenocepacia J2315 chromosome 1, complete sequenceTetR family regulatory protein4e-0755.1
NC_014408:1314382:133323313332331333886654Methanothermobacter marburgensis str. Marburg chromosome, completetranscriptional regulator6e-0754.7
NC_005957:4311679:432219943221994322786588Bacillus thuringiensis serovar konkukian str. 97-27, completetranscriptional regulator5e-0754.7
NC_011969:4235818:424498242449824245569588Bacillus cereus Q1 chromosome, complete genometranscriptional regulator5e-0754.7
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome5e-0754.7
NC_009338:4869700:487721848772184877814597Mycobacterium gilvum PYR-GCK chromosome, complete genomeTetR family transcriptional regulator6e-0754.3
NC_015556:819503:819503819503820162660Pseudomonas fulva 12-X chromosome, complete genometranscriptional regulator, TetR family7e-0754.3
NC_015683:1270782:127368612736861274264579Corynebacterium ulcerans BR-AD22 chromosome, complete genomeTetR family transcription regulator1e-0653.5
NC_020244:3358399:336320833632083363792585Bacillus subtilis XF-1, complete genomeputative transcriptional regulator (TetR/AcrR family)1e-0653.5
NC_011658:4301633:431215343121534312740588Bacillus cereus AH187 chromosome, complete genomeTetR family transcriptional regulator1e-0653.5
NC_004431:4319152:432716243271624327731570Escherichia coli CFT073, complete genomehypothetical protein1e-0653.5
NC_011894:6888562:689151368915136892166654Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, TetR family1e-0653.5
NC_014329:1169674:117574811757481176326579Corynebacterium pseudotuberculosis FRC41 chromosome, completeTetR family transcriptional regulator2e-0653.1
NC_016781:1169632:117570611757061176284579Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeHTH-type transcriptional repressor AcnR2e-0653.1
NC_017031:1172644:117556511755651176143579Corynebacterium pseudotuberculosis P54B96 chromosome, completeHTH-type transcriptional repressor AcnR2e-0653.1
NC_017301:1172660:117557511755751176153579Corynebacterium pseudotuberculosis C231 chromosome, completeHTH-type transcriptional repressor AcnR2e-0653.1
NC_017303:1172656:117557711755771176155579Corynebacterium pseudotuberculosis I19 chromosome, complete genomeHTH-type transcriptional repressor AcnR2e-0653.1
NC_016932:1157587:116050811605081161086579Corynebacterium pseudotuberculosis 316 chromosome, complete genomeHTH-type transcriptional repressor AcnR2e-0653.1
NC_017904:666285:683871683871684452582Mycobacterium sp. MOTT36Y chromosome, complete genomeTetR family transcriptional regulator2e-0653.1
NC_015224:1641819:164285416428541643564711Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative DNA-binding transcriptional regulator2e-0653.1
NC_012522:98567:113319113319113927609Rhodococcus opacus B4, complete genomeputative TetR family transcriptional regulator1e-0653.1
NC_009663:946285:955392955392955952561Sulfurovum sp. NBC37-1, complete genomeTetR family transcriptional regulator1e-0653.1
NC_013385:1007616:100995610099561010600645Ammonifex degensii KC4, complete genometranscriptional regulator, TetR family1e-0653.1
NC_010102:1979742:200090520009052001543639Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0652.8
NC_012125:2646792:266813126681312668769639Salmonella enterica subsp. enterica serovar Paratyphi C straintranscriptional regulator2e-0652.8
NC_009253:3272000:327444032744403275027588Desulfotomaculum reducens MI-1 chromosome, complete genomeTetR family transcriptional regulator2e-0652.8
NC_008010:1:138201382014416597Deinococcus geothermalis DSM 11300 plasmid 1, complete sequencetranscriptional regulator, TetR family2e-0652.8
NC_016935:4038265:404800040480004048605606Paenibacillus mucilaginosus 3016 chromosome, complete genomeTetR family transcriptional regulator2e-0652.8
NC_009253:3317533:332094233209423321559618Desulfotomaculum reducens MI-1 chromosome, complete genomeTetR family transcriptional regulator2e-0652.8
NC_016077:998741:105457010545701055256687Acidaminococcus intestini RyC-MR95 chromosome, complete genometranscriptional regulator3e-0652.4
NC_013595:8553904:856484385648438565427585Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, TetR family3e-0652.4
NC_016802:1256287:126826312682631268835573Corynebacterium diphtheriae HC02 chromosome, complete genomeTetR family transcriptional regulator3e-0652
NC_016801:1255611:131249413124941313066573Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeTetR family transcriptional regulator3e-0652
NC_016800:1243000:129592912959291296501573Corynebacterium diphtheriae BH8 chromosome, complete genomeTetR family transcriptional regulator3e-0652
NC_016790:1218596:123416012341601234732573Corynebacterium diphtheriae VA01 chromosome, complete genomeTetR family transcriptional regulator3e-0652
NC_016789:1295918:131147913114791312051573Corynebacterium diphtheriae PW8 chromosome, complete genomeTetR family transcriptional regulator3e-0652
NC_016787:1240000:125678212567821257354573Corynebacterium diphtheriae HC03 chromosome, complete genomeTetR family transcriptional regulator3e-0652
NC_016785:1233384:124894812489481249520573Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeTetR family transcriptional regulator3e-0652
NC_002935:1237585:129367312936731294245573Corynebacterium diphtheriae NCTC 13129, complete genomePutative TetR-famlily transcriptional regulator3e-0652
NC_016782:1251796:126736212673621267934573Corynebacterium diphtheriae 241 chromosome, complete genomeTetR-famlily transcriptional regulator3e-0652
NC_016786:1251765:126733112673311267903573Corynebacterium diphtheriae HC01 chromosome, complete genomeTetR family transcriptional regulator3e-0652
NC_011147:1763681:178636117863611786999639Salmonella enterica subsp. enterica serovar Paratyphi A strtranscriptional regulator3e-0652
NC_006511:1770000:179117817911781791816639Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative transcriptional regulator3e-0652
NC_008752:415599:420283420283420975693Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscriptional regulator, TetR family3e-0652
NC_009615:1553556:155669615566961557325630Parabacteroides distasonis ATCC 8503 chromosome, complete genometranscriptional regulator3e-0652
NC_014732:141000:141391141391141990600Halogeometricum borinquense DSM 11551 plasmid pHBOR04, completetranscriptional regulator, TetR family3e-0652
NC_016788:1214026:126677112667711267367597Corynebacterium diphtheriae HC04 chromosome, complete genomeTetR family transcriptional regulator3e-0652
NC_016783:1274000:129165912916591292255597Corynebacterium diphtheriae INCA 402 chromosome, complete genomeTetR-famlily transcriptional regulator3e-0652
NC_016799:1268706:132281613228161323388573Corynebacterium diphtheriae 31A chromosome, complete genomeTetR family transcriptional regulator3e-0652
NC_010002:4256651:428231342823134282894582Delftia acidovorans SPH-1, complete genometranscriptional regulator, TetR family5e-0651.6
NC_009921:4903688:490439949043994905013615Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family5e-0651.6
NC_015732:91816:946869468695297612Spirochaeta caldaria DSM 7334 chromosome, complete genomeTetR family transcriptional regulator5e-0651.6
NC_017506:1:166661666617247582Marinobacter adhaerens HP15 chromosome, complete genomeTetR family transcriptional regulator4e-0651.6
NC_003296:1461538:146352614635261464227702Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE TRANSCRIPTION REGULATOR PROTEIN4e-0651.6
NC_015422:3366500:336988733698873370549663Alicycliphilus denitrificans K601 chromosome, complete genomeTetR family transcriptional regulator4e-0651.6
NC_012673:2535427:257965825796582580236579Exiguobacterium sp. AT1b, complete genometranscriptional regulator, TetR family4e-0651.6
NC_015690:3477573:348976134897613490366606Paenibacillus mucilaginosus KNP414 chromosome, complete genomeTetR family transcriptional regulator5e-0651.2
NC_016948:2931285:294939729493972949987591Mycobacterium intracellulare MOTT-64 chromosome, complete genomeTetR family transcriptional regulator6e-0651.2
NC_015589:3852217:386542538654253865997573Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeregulatory protein TetR6e-0651.2
NC_015172:2628128:263108326310832631667585Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeregulatory protein TetR6e-0651.2
NC_011772:4565418:458020945802094580847639Bacillus cereus G9842, complete genometranscriptional regulator, TetR family8e-0650.8
NC_009077:4810379:482799648279964828661666Mycobacterium sp. JLS, complete genometranscriptional regulator, TetR family8e-0650.8
NC_013385:1882549:191438119143811914974594Ammonifex degensii KC4, complete genometranscriptional regulator, TetR family6e-0650.8
NC_016894:3935161:395446439544643955075612Acetobacterium woodii DSM 1030 chromosome, complete genometranscriptional regulator TetR family6e-0650.8
NC_015500:2866027:287133328713332871929597Treponema brennaborense DSM 12168 chromosome, complete genomeregulatory protein TetR8e-0650.4
NC_013165:647894:654200654200654871672Slackia heliotrinireducens DSM 20476, complete genometranscriptional regulator9e-0650.4
NC_013205:854983:879742879742880350609Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transcriptional regulator, TetR family9e-0650.4
NC_013665:2132000:213526921352692135904636Methanocella paludicola SANAE, complete genomeTetR family transcriptional regulator9e-0650.4
NC_004193:375416:552830552830553441612Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator9e-0650.4