Pre_GI Gene

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Host: NC_008268 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008268:4669530 Rhodococcus sp. RHA1, complete genome

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
46695304670471942hypothetical proteinBLASTP
46704834671277795hypothetical proteinBLASTP
46716704671984315hypothetical proteinBLASTP
46720354672772738probable hydrolaseQuickGO ontologyBLASTP
46729304673268339possible excisionaseQuickGO ontologyBLASTP
467391746749361020O-methyltransferaseQuickGO ontologyBLASTP
467499546762211227hypothetical proteinBLASTP
467646546777241260hypothetical proteinBLASTP
46778504678704855branched-chain-amino-acid transaminaseQuickGO ontologyBLASTP
46787064679524819hypothetical proteinBLASTP
467959846830383441ABC-type multidrug resistance transporter ATPase and permease domainsQuickGO ontologyBLASTP
468303246840841053hypothetical proteinBLASTP
468430246855581257hypothetical proteinBLASTP
46855614686556996O-methyltransferaseQuickGO ontologyBLASTP
46865584687538981probable AG-specific adenine DNA glycosylaseQuickGO ontologyBLASTP
46875374688163627carbonate dehydrataseQuickGO ontologyBLASTP
46882234688987765hypothetical proteinBLASTP
46889804689942963asparaginaseQuickGO ontologyBLASTP
468995846914031446L-asparagine permease APC familyQuickGO ontologyBLASTP
469140046928481449aspartate ammonia-lyaseQuickGO ontologyBLASTP
46930334693788756transcriptional regulator GntR familyQuickGO ontologyBLASTP
469380446948891086hypothetical proteinBLASTP