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Query: NC_008268:4669530 Rhodococcus sp. RHA1, complete genome

Start: 4669530, End: 4695099, Length: 25570

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012522:46922604692260471230420045Rhodococcus opacus B4, complete genome011320BLASTN svgBLASTP svg
NC_008268:70522027052202707309920898Rhodococcus sp. RHA1, complete genome2e-62248BLASTN svgBLASTP svg
NC_009142:5647737*5647737567459926863Saccharopolyspora erythraea NRRL 2338, complete genome4e-21111BLASTN svgBLASTP svg
NC_013521:29245402924540295147426935Sanguibacter keddieii DSM 10542, complete genome6e-20107BLASTN svgBLASTP svg
NC_015859:16315731631573165925327681Corynebacterium variabile DSM 44702 chromosome, complete genome9e-19103BLASTN svgBLASTP svg
NC_013173:3890370*3890370390934018971Desulfomicrobium baculatum DSM 4028, complete genome3e-18101BLASTN svgBLASTP svg
NC_006087:88576088576091259926840Leifsonia xyli subsp. xyli str. CTCB07, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_009142:60860006086000610482618827Saccharopolyspora erythraea NRRL 2338, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015514:39116553911655393796226308Cellulomonas fimi ATCC 484 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013961:3269368*3269368330269433327Erwinia amylovora, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013158:2714778*2714778274059925822Halorhabdus utahensis DSM 12940, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013850:49933074993307502215628850Klebsiella variicola At-22 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009648:4958500*4958500498569827199Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_019673:32536503253650327924925600Saccharothrix espanaensis DSM 44229 complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015500:2866027*2866027291764651620Treponema brennaborense DSM 12168 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg