Pre_GI Gene

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Host: NC_008268 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008268:361424 Rhodococcus sp. RHA1, complete genome

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
361424362338915hypothetical protein
362405362722318hypothetical protein
362762363676915probable exodeoxyribonuclease IIIQuickGO ontologyBLASTP
3638323654061575hypothetical protein
365396366049654hypothetical proteinBLASTP
366327367085759probable 3-oxoacyl-acyl-carrier-protein reductaseQuickGO ontologyBLASTP
367161367793633hypothetical proteinBLASTP
368207368617411hypothetical protein
368769369269501hypothetical proteinBLASTP
369410370369960transcriptional regulator AraC familyQuickGO ontologyBLASTP
370504371142639hypothetical proteinBLASTP
3711593723821224MmgEPrpD familyQuickGO ontologyBLASTP
3725713741211551metabolite transporter MFS superfamilyQuickGO ontologyBLASTP
374193374933741transcriptional regulator GntR familyQuickGO ontologyBLASTP
3753043764941191acyl-CoA dehydrogenaseQuickGO ontologyBLASTP
376491377030540possible acyl-CoA transferase N-terminalQuickGO ontologyBLASTP
377035377703669possible CoA-transferase C-terminalQuickGO ontologyBLASTP
377711378688978citrate pro-3S-lyase beta subunitQuickGO ontologyBLASTP
378692379222531probable MaoC proteinQuickGO ontologyBLASTP
3795013809371437aldehyde dehydrogenaseQuickGO ontologyBLASTP
380960381280321hypothetical protein
381867382238372possible transposaseQuickGO ontologyBLASTP
382235383128894probable transposaseQuickGO ontologyBLASTP