Pre_GI: BLASTP Hits

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Query: NC_008268:361424:374193 Rhodococcus sp. RHA1, complete genome

Start: 374193, End: 374933, Length: 741

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014829:3964616:398018939801893980911723Bacillus cellulosilyticus DSM 2522 chromosome, complete genometranscriptional regulator, GntR family3e-1478.6
NC_003296:87313:886398863989460822Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE DNA-BINDING TRANSCRIPTIONAL REGULATORY TRANSCRIPTION REGULATOR PROTEIN4e-1478.6
NC_006905:3717306:373309237330923733811720Salmonella enterica subsp. enterica serovar Choleraesuis strputative regulatory protein, gntR family7e-1477.4
NC_004193:375416:640434640434641180747Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator9e-1477.4
NC_015376:2061990:208370120837012084468768Burkholderia gladioli BSR3 chromosome chromosome 2, completeTranscriptional regulator1e-1376.6
NC_009328:3322802:333800633380063338722717Geobacillus thermodenitrificans NG80-2 chromosome, complete genometranscriptional regulator9e-1373.9
NC_020210:3341976:335719633571963357912717Geobacillus sp. GHH01, complete genomeputative transcriptional regulator9e-1373.9
NC_011830:2811441:282752028275202828290771Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, GntR family6e-1271.2
NC_007907:1732500:174509917450991745869771Desulfitobacterium hafniense Y51, complete genomehypothetical protein6e-1271.2
NC_016582:9551123:956203095620309562755726Streptomyces bingchenggensis BCW-1 chromosome, complete genomeGntR family transcriptional regulator2e-1169.3
NC_008095:7614000:761995076199507620693744Myxococcus xanthus DK 1622, complete genometranscriptional regulator, GntR family2e-1169.3
NC_015563:4773415:478062647806264781414789Delftia sp. Cs1-4 chromosome, complete genomeGntR family transcriptional regulator with UTRA sensor domain4e-1168.6
NC_012721:979656:100139510013951002225831Burkholderia glumae BGR1 chromosome 2, complete genomeTranscriptional regulator, GntR family protein4e-1168.6
NC_007644:1352794:135596513559651356696732Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, GntR family4e-1168.6
NC_014498:99015:117301117301118044744Streptococcus pneumoniae 670-6B chromosome, complete genomeGntR family transcriptional regulator9e-1167.4
NC_010380:124655:142940142940143683744Streptococcus pneumoniae Hungary19A-6, complete genometranscriptional regulator, GntR family protein9e-1167.4
NC_013510:5115500:512327551232755124111837Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, GntR family1e-1067
NC_014910:2015627:202915620291562029947792Alicycliphilus denitrificans BC chromosome, complete genomeubic transcription regulator-associated domain-containing protein1e-1067
NC_015957:5082172:508617150861715086989819Streptomyces violaceusniger Tu 4113 chromosome, complete genomeGntR family transcriptional regulator with UTRA sensor domain3e-1065.5
NC_010002:1584500:160910616091061609852747Delftia acidovorans SPH-1, complete genometranscriptional regulator, GntR family4e-1065.5
NC_008262:2649289:265001426500142650736723Clostridium perfringens SM101, complete genometranscriptional regulator, GntR family4e-1065.1
NC_010723:3499291:351288235128823513610729Clostridium botulinum E3 str. Alaska E43, complete genometranscriptional regulator4e-1065.1
NC_014363:427393:442984442984443715732Olsenella uli DSM 7084 chromosome, complete genometranscriptional regulator, GntR family4e-1065.1
NC_016947:666627:675648675648676442795Mycobacterium intracellulare MOTT-02 chromosome, complete genomeregulatory protein1e-0963.9
NC_012559:2309566:231322923132292313960732Laribacter hongkongensis HLHK9, complete genomeprobable transcriptional regulator, GntR family9e-1063.9
NC_015389:1977736:198394319839431984632690Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, GntR family1e-0963.5
NC_020291:5808856:583221158322115832921711Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeHTH-type transcriptional regulator GmuR2e-0963.2
NC_010511:871905:884201884201884926726Methylobacterium sp. 4-46 chromosome, complete genomeGntR family transcriptional regulator2e-0963.2
NC_008390:2156188:215618821561882156958771Burkholderia cepacia AMMD chromosome 1, complete sequencetranscriptional regulator, GntR family2e-0963.2
NC_015942:63440:819408194082698759Acidithiobacillus ferrivorans SS3 chromosome, complete genomeGntR family transcriptional regulator with UTRA sensor domain2e-0962.8
NC_011894:3797500:380047338004733801228756Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, GntR family2e-0962.4
NC_007929:1290568:129384012938401294538699Lactobacillus salivarius subsp. salivarius UCC118, complete genomeTranscriptional regulator, GntR family5e-0961.6
NC_020133:5485528:549970854997085500487780Mycobacterium liflandii 128FXT, complete genomeregulatory protein4e-0961.6
NC_016948:678939:688007688007688786780Mycobacterium intracellulare MOTT-64 chromosome, complete genometranscriptional regulator4e-0961.6
NC_014377:321949:321949321949322656708Thermosediminibacter oceani DSM 16646 chromosome, complete genometranscriptional regulator, GntR family1e-0860.5
NC_008525:1493317:149648314964831497184702Pediococcus pentosaceus ATCC 25745, complete genomeTranscriptional regulator1e-0860.5
NC_016025:552000:562281562281562991711Candidatus Chloracidobacterium thermophilum B chromosome chromosometranscriptional regulator1e-0860.5
NC_015602:1143038:114488711448871145612726Lactobacillus kefiranofaciens ZW3 chromosome, complete genometranscriptional regulator1e-0860.5
NC_018515:3169973:318893631889363189691756Desulfosporosinus meridiei DSM 13257 chromosome, complete genometranscriptional regulator1e-0860.5
NC_002976:1540794:154170815417081542085378Staphylococcus epidermidis RP62A, complete genometranscriptional regulator, GntR family1e-0860.1
NC_003155:4592000:462092046209204621708789Streptomyces avermitilis MA-4680, complete genomeregulatory protein KorSA, GntR-family transcriptional regulator1e-0860.1
NC_015387:2072237:207425220742522074971720Marinithermus hydrothermalis DSM 14884 chromosome, complete genometranscriptional regulator, GntR family with UTRA sensor domain protein2e-0859.7
NC_011740:3739395:374508437450843745848765Escherichia fergusonii ATCC 35469, complete genomeputative GntR-family transcriptional regulator2e-0859.3
UCMB5137:2128500:214259721425972142974378Bacillus atrophaeus UCMB-5137GntR family transcriptional regulator2e-0859.3
NC_015424:2510764:252788125278812528600720Aeromonas veronii B565 chromosome, complete genometranscriptional regulator of succinyl-CoA synthetase operon3e-0858.9
NC_015949:47414:482944829448677384Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeGntR family transcriptional regulator3e-0858.9
NC_016887:221788:238809238809239579771Nocardia cyriacigeorgica GUH-2, complete genometranscriptional regulator3e-0858.9
NC_019673:1420198:143062914306291431012384Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein3e-0858.9
NC_013929:5248000:526121052612105261998789Streptomyces scabiei 87.22 chromosome, complete genometranscriptional regulator4e-0858.5
NC_012470:1061392:106354310635431064241699Streptococcus equi subsp. zooepidemicus, complete genomeGntR family regulatory protein4e-0858.5
NC_003155:4906639:491297149129714913759789Streptomyces avermitilis MA-4680, complete genomeregulatory protein KorSA, GntR-family transcriptional regulator4e-0858.5
CP002207:2169277:217930621793062179683378Bacillus atrophaeus 1942, complete genomeGntR family transcriptional regulator4e-0858.5
NC_014639:2169277:217930621793062179683378Bacillus atrophaeus 1942 chromosome, complete genomeGntR family transcriptional regulator4e-0858.5
NC_014363:1605349:161115216111521611877726Olsenella uli DSM 7084 chromosome, complete genometranscriptional regulator, GntR family4e-0858.5
NC_010999:623489:623489623489624226738Lactobacillus casei, complete genomeTranscriptional regulator5e-0858.2
NC_014246:676570:690222690222690977756Mobiluncus curtisii ATCC 43063 chromosome, complete genomeGntR family transcriptional regulator5e-0858.2
NC_009328:1903291:1904069190406919051631095Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeprotein AraR5e-0858.2
NC_013510:5499447:551960755196075520026420Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, GntR family5e-0858.2
NC_015389:809474:830620830620831354735Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, GntR family7e-0857.8
NC_010572:3925803:393580339358033936576774Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative GntR-family transcriptional regulator7e-0857.8
NC_015434:228912:238390238390238791402Verrucosispora maris AB-18-032 chromosome, complete genomeGntR family transcriptional regulator6e-0857.8
NC_014363:1396912:142441014244101425213804Olsenella uli DSM 7084 chromosome, complete genometranscriptional regulator, GntR family6e-0857.8
NC_014376:4369666:439016943901694390897729Clostridium saccharolyticum WM1 chromosome, complete genometranscriptional regulator, GntR family6e-0857.8
NC_015160:612000:634388634388635122735Odoribacter splanchnicus DSM 20712 chromosome, complete genometranscriptional regulator, GntR family1e-0757.4
NC_013411:2767400:2789798278979827908921095Geobacillus sp. Y412MC61, complete genometranscriptional regulator, GntR family with LacI sensor8e-0857.4
NC_014915:1909275:1929734192973419308281095Geobacillus sp. Y412MC52 chromosome, complete genometranscriptional regulator, GntR family with LacI sensor8e-0857.4
NC_014364:815346:8612718612718623531083Spirochaeta smaragdinae DSM 11293 chromosome, complete genometranscriptional regulator, GntR family with LacI sensor8e-0857.4
NC_014206:1694330:1708771170877117098651095Geobacillus sp. C56-T3 chromosome, complete genomeGntR family transcriptional regulator8e-0857.4
NC_020210:1951746:1968428196842819695221095Geobacillus sp. GHH01, complete genomearabinose metabolism transcriptional repressor8e-0857.4
NC_006510:1921541:1944770194477019458641095Geobacillus kaustophilus HTA426, complete genomearabinose metabolism transcriptional repressor8e-0857.4
NC_016593:2015321:2015321201532120164151095Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completearabinose metabolism transcriptional repressor8e-0857.4
NC_013093:7437033:745068174506817451064384Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, GntR family1e-0757
NC_015567:2420169:242669124266912427395705Serratia sp. AS9 chromosome, complete genomeGntR family transcriptional regulator with UTRA sensor domain2e-0756.6
NC_015566:2420287:242680924268092427513705Serratia sp. AS12 chromosome, complete genomeGntR family transcriptional regulator with UTRA sensor domain2e-0756.6
NC_010694:2492378:250906425090642509819756Erwinia tasmaniensis, complete genomeGntR-family transcriptional regulatory protein2e-0756.6
NC_020164:887510:906911906911907288378Staphylococcus warneri SG1, complete genomeGntR family transcriptional regulator1e-0756.6
NC_014210:144036:153050153050153823774Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, GntR family1e-0756.6
NC_009828:1530732:153604915360491536768720Thermotoga lettingae TMO, complete genometranscriptional regulator, GntR family1e-0756.6
NC_015656:381554:392794392794393570777Frankia symbiont of Datisca glomerata chromosome, complete genomeGntR family transcriptional regulator with UTRA sensor domain1e-0756.6
NC_011899:1603500:1607699160769916088051107Halothermothrix orenii H 168, complete genomeregulatory protein GntR HTH2e-0756.2
NC_006322:1994000:1999578199957820007441167Bacillus licheniformis ATCC 14580, complete genomeAraR3e-0755.8
NC_015573:2463123:249958324995832500296714Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeGntR family transcriptional regulator with UTRA sensor domain3e-0755.8
NC_011886:1035500:104943710494371050177741Arthrobacter chlorophenolicus A6, complete genometranscriptional regulator, GntR family3e-0755.8
NC_007492:3180480:322535632253563226087732Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, GntR family2e-0755.8
NC_005085:1096000:111077111107711111643873Chromobacterium violaceum ATCC 12472, complete genomeprobable transcriptional regulator, GntR family2e-0755.8
NC_006677:1255079:126827412682741269014741Gluconobacter oxydans 621H, complete genomeHistidine utilization repressor2e-0755.8
NC_007275:1:149981499815699702Pseudomonas syringae pv. phaseolicola 1448A small plasmid, completetranscriptional regulator, GntR family2e-0755.8
NC_008497:556365:574068574068574769702Lactobacillus brevis ATCC 367, complete genomeTranscriptional regulator3e-0755.5
NC_007974:2048000:206835720683572069085729Ralstonia metallidurans CH34 chromosome 2, complete sequencetranscriptional regulator, GntR family4e-0755.5
NC_009953:1799416:180887218088721809129258Salinispora arenicola CNS-205 chromosome, complete genomeGntR family transcriptional regulator5e-0755.1
NC_015389:1070500:109313610931361093876741Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, GntR family6e-0754.7
NC_003037:1245645:124711312471131248060948Sinorhizobium meliloti 1021 plasmid pSymA, complete sequencePutative histidine utilization repressor protein6e-0754.7
NC_007509:832473:835233835233836093861Burkholderia sp. 383 chromosome 3, complete sequencetranscriptional regulator, GntR family6e-0754.7
NC_015389:1782825:179971917997191800444726Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, GntR family7e-0754.3
NC_016047:683368:7007157007157021631449Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeCrp/Fnr family transcriptional regulator7e-0754.3
NC_003888:4613000:462376646237664624524759Streptomyces coelicolor A3(2), complete genomeGntR-family regulatory protein8e-0754.3
NC_003888:3602753:360891636089163609695780Streptomyces coelicolor A3(2), complete genomekorSA, regulatory protein8e-0754.3
NC_015957:1070500:107590210759021076678777Streptomyces violaceusniger Tu 4113 chromosome, complete genomeGntR family transcriptional regulator1e-0653.9
NC_010676:304405:323839323839324528690Burkholderia phytofirmans PsJN chromosome 2, complete sequenceGntR domain protein1e-0653.5
NC_013235:682902:696087696087696872786Nakamurella multipartita DSM 44233, complete genometranscriptional regulator, GntR family1e-0653.5
NC_013501:1337489:134428613442861345053768Rhodothermus marinus DSM 4252, complete genomeGntR domain protein1e-0653.5
NC_010001:2836995:285926328592632859625363Clostridium phytofermentans ISDg, complete genometranscriptional regulator, GntR family1e-0653.5
NC_013595:9547254:956468295646829565155474Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, GntR family2e-0653.1
NC_010524:933191:950483950483951244762Leptothrix cholodnii SP-6, complete genometranscriptional regulator, GntR family2e-0653.1
NC_016582:5393568:540514154051415405914774Streptomyces bingchenggensis BCW-1 chromosome, complete genomeGntR family transcriptional regulator2e-0653.1
NC_021177:4124839:413883841388384139617780Streptomyces fulvissimus DSM 40593, complete genomekorSA, regulatory protein2e-0653.1
NC_016114:3575955:358320535832053583984780Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeGntR family transcriptional regulator2e-0652.8
NC_004369:2465461:246886924688692469660792Corynebacterium efficiens YS-314, complete genomeputative transcription regulator2e-0652.8
NC_014963:3530097:354586935458693546669801Terriglobus saanensis SP1PR4 chromosome, complete genomeGntR family transcriptional regulator2e-0652.8
NC_008254:3246306:324909532490953249820726Mesorhizobium sp. BNC1, complete genometranscriptional regulator, histidine utilization repressor, GntR family2e-0652.8
NC_014323:1196209:1197605119760511991551551Herbaspirillum seropedicae SmR1 chromosome, complete genomeMocR family transcription regulator protein2e-0652.8
NC_014118:1528851:152885115288511529540690Burkholderia sp. CCGE1002 chromosome chromosome 2, completeregulatory protein GntR HTH3e-0652.4
NC_014532:1713987:172126917212691721979711Halomonas elongata DSM 2581, complete genomehistidine utilization repressor3e-0652.4
NC_007777:5087405:509495850949585095722765Frankia sp. CcI3, complete genometranscriptional regulator, GntR family3e-0652.4
NC_014815:658893:664402664402665223822Micromonospora sp. L5 chromosome, complete genometranscriptional regulator, gntr family3e-0652.4
NC_015656:1469501:148617614861761486967792Frankia symbiont of Datisca glomerata chromosome, complete genomeGntR family transcriptional regulator with UTRA sensor domain3e-0652.4
NC_014840:205723:266022266022266699678Pantoea sp. At-9b plasmid pPAT9B03, complete sequencetranscriptional regulator, GntR family4e-0652
NC_010002:4073724:4077325407732540788391515Delftia acidovorans SPH-1, complete genometranscriptional regulator, GntR family with aminotransferase domain4e-0652
NC_007644:1352794:135436113543611355110750Moorella thermoacetica ATCC 39073, complete genomeregulatory protein GntR, HTH5e-0651.6
NC_003888:6103534:613628961362896137068780Streptomyces coelicolor A3(2), complete genometranscriptional regulator7e-0651.2
NC_015975:380500:405127405127405825699Lactobacillus ruminis ATCC 27782 chromosome, complete genomeGntR family transcriptional regulator7e-0651.2
NC_016631:5478098:550109155010915501534444Granulicella mallensis MP5ACTX8 chromosome, complete genomeGntR family transcriptional regulator6e-0651.2
NC_010723:3499291:351407835140783514803726Clostridium botulinum E3 str. Alaska E43, complete genometranscriptional regulator6e-0651.2
NC_016582:7101701:711106371110637111593531Streptomyces bingchenggensis BCW-1 chromosome, complete genomeGntR family transcriptional regulator protein6e-0651.2
NC_015556:2265940:2291096229109622925951500Pseudomonas fulva 12-X chromosome, complete genometranscriptional regulator, GntR family with aminotransferase domain8e-0650.8
NC_014815:5888934:590554959055495906340792Micromonospora sp. L5 chromosome, complete genometranscriptional regulator, gntr family9e-0650.8
NC_017093:2129450:213507721350772135481405Actinoplanes missouriensis 431, complete genomeGntR family transcriptional regulator1e-0550.4