Pre_GI Gene

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Host: NC_008268 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008268:3418000 Rhodococcus sp. RHA1, complete genome

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
34180823418726645possible transcriptional regulator GntR familyQuickGO ontologyBLASTP
34189033419373471possible transposaseQuickGO ontologyBLASTP
34194263420220795possible transcriptional regulator GntR familyQuickGO ontologyBLASTP
342023834219381701L-lactate permeaseQuickGO ontologyBLASTP
342193534233051371probable D-lactate dehydrogenase cytochromeQuickGO ontologyBLASTP
342388534257231839probable transcriptional regulator LuxR familyQuickGO ontologyBLASTP
34262653426573309hypothetical protein
342697634281061131possible transposaseQuickGO ontologyBLASTP
34282323428495264hypothetical protein
34285243429099576hypothetical protein
342938034306301251possible transcriptional regulatorQuickGO ontologyBLASTP
34312973432070774possible enoyl-CoA hydrataseQuickGO ontologyBLASTP
343207234332591188probable acyl-CoA dehydrogenaseQuickGO ontologyBLASTP
343325934343321074probable acyl-CoA dehydrogenaseQuickGO ontologyBLASTP
343432934359451617probable acid-CoA ligaseQuickGO ontologyBLASTP
343599034376211632cyclopentanone 12-monooxygenaseQuickGO ontologyBLASTP
34376913437966276hypothetical protein
34380093438875867probable 5-valerolactone hydrolaseQuickGO ontologyBLASTP
34390813439932852probable transposaseQuickGO ontologyBLASTP