Pre_GI: BLASTP Hits

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Query: NC_008268:3418000:3419426 Rhodococcus sp. RHA1, complete genome

Start: 3419426, End: 3420220, Length: 795

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015145:3236445:327110632711063271798693Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomeGntR family transcriptional regulator4e-60231
NC_009664:63230:728087280873572765Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, GntR family2e-25116
NC_004129:4993974:499868849986884999341654Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, GntR family5e-1374.7
NC_009668:46010:612776127761927651Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceGntR family transcriptional regulator5e-1168.6
NC_012660:1804610:183445618344561835124669Pseudomonas fluorescens SBW25 chromosome, complete genomeputative GntR family regulatory protein5e-1065.1
NC_008596:4104476:412930241293024129928627Mycobacterium smegmatis str. MC2 155, complete genometranscriptional regulator, GntR family protein5e-1065.1
NC_008254:611437:6283116283116295011191Mesorhizobium sp. BNC1, complete genometranscriptional regulator, GntR family3e-0858.9
NC_010501:4080937:408689040868904087633744Pseudomonas putida W619, complete genometranscriptional regulator, GntR family1e-0757.4
NC_015458:2441435:246138524613852462053669Pusillimonas sp. T7-7 chromosome, complete genomeGntR family transcriptional regulator3e-0755.8
NC_017986:4374979:438945543894554390258804Pseudomonas putida ND6 chromosome, complete genomeGntR family transcriptional regulator6e-0754.7
NC_009512:1691930:170640617064061707209804Pseudomonas putida F1, complete genometranscriptional regulator, GntR family6e-0754.7
NC_016803:3502749:351406835140683514757690Desulfovibrio desulfuricans ND132 chromosome, complete genomeGntR family transcriptional regulator2e-0652.8
NC_007348:752692:758795758795759571777Ralstonia eutropha JMP134 chromosome 2, complete sequenceregulatory protein GntR, HTH:GntR, C-terminal3e-0652.4
NC_002947:4931476:493700649370064937698693Pseudomonas putida KT2440, complete genometranscriptional regulator, GntR family3e-0652.4
NC_014963:3175912:317591231759123176580669Terriglobus saanensis SP1PR4 chromosome, complete genomeGntR family transcriptional regulator4e-0652