Pre_GI Gene

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Host: NC_008268 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008268:3233961 Rhodococcus sp. RHA1, complete genome

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
323396132353041344hypothetical proteinBLASTP
32352893235795507hypothetical proteinBLASTP
323602232371101089possible acyl-CoA dehydrogenaseQuickGO ontologyBLASTP
323711032382881179probable acyl-CoA dehydrogenaseQuickGO ontologyBLASTP
32385063239294789probable transciptional regulator IclR familyQuickGO ontologyBLASTP
32395023239747246hypothetical protein
32402043240479276hypothetical protein
324069232423411650probable cyclohexanone monooxygenaseQuickGO ontologyBLASTP
32423383242634297hypothetical proteinBLASTP
32426993243568870probable senescence marker protein-30QuickGO ontologyBLASTP
324384932452971449probable aldehyde dehydrogenase NADQuickGO ontologyBLASTP
324541232466651254probable formyl CoA transferaseQuickGO ontologyBLASTP
32468173246969153hypothetical protein
32473333247779447hypothetical protein
32480423248842801probable enoyl-CoA hydrataseQuickGO ontologyBLASTP
32491113249470360hypothetical protein
324950032505431044possible surface antigen proteinQuickGO ontologyBLASTP
32507493251258510possible chromate resistance proteinQuickGO ontologyBLASTP
32512553251686432probable chromate resistance proteinQuickGO ontologyBLASTP
325174432531471404probable chromate transporter chromate ion transporter familyQuickGO ontologyBLASTP
325339332547781386cytochrome P450 CYP136QuickGO ontologyBLASTP
32548463255466621possible transcriptional regulator TetR familyQuickGO ontologyBLASTP
325580932570531245hypothetical proteinBLASTP
325718732587401554aldehyde dehydrogenase NADQuickGO ontologyBLASTP
32587653259592828dehydrogenaseQuickGO ontologyBLASTP