Pre_GI: BLASTP Hits

Some Help

Query: NC_008268:3233961:3254846 Rhodococcus sp. RHA1, complete genome

Start: 3254846, End: 3255466, Length: 621

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008699:3775561:377911937791193779730612Nocardioides sp. JS614, complete genomeputative transcriptional regulator, TetR family1e-31135
NC_012522:5895946:591495359149535915576624Rhodococcus opacus B4, complete genomeputative TetR family transcriptional regulator2e-22105
NC_010397:2063561:206956420695642070196633Mycobacterium abscessus chromosome Chromosome, complete sequencePutative transcriptional regulator2e-1892
NC_016604:5228500:524920352492035249835633Mycobacterium rhodesiae NBB3 chromosome, complete genome4e-1891.3
NC_009077:1027357:106273810627381063337600Mycobacterium sp. JLS, complete genometranscriptional regulator, TetR family3e-1788.6
NC_017904:4203257:420486842048684205464597Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein5e-1787.4
NC_010612:3813481:382887538288753829516642Mycobacterium marinum M, complete genometranscriptional regulatory protein (possibly TetR-family)6e-1684
NC_016604:5228500:525095452509545251628675Mycobacterium rhodesiae NBB3 chromosome, complete genometranscriptional regulator2e-1582.4
NC_016947:666627:667804667804668376573Mycobacterium intracellulare MOTT-02 chromosome, complete genomehypothetical protein2e-1582.4
NC_009338:4913510:492898849289884929629642Mycobacterium gilvum PYR-GCK chromosome, complete genomeTetR family transcriptional regulator9e-1580.1
NC_010612:3813481:383062638306263831315690Mycobacterium marinum M, complete genometranscriptional regulatory protein (possibly Acr-family)2e-1479
NC_010682:460523:461506461506462174669Ralstonia pickettii 12J chromosome 1, complete sequencetranscriptional regulator, TetR family4e-1478.2
NC_017904:2379387:243036724303672431053687Mycobacterium sp. MOTT36Y chromosome, complete genomeAcrR family transcriptional regulator7e-1477
NC_009338:4913510:492972149297214930419699Mycobacterium gilvum PYR-GCK chromosome, complete genomeTetR family transcriptional regulator8e-1477
NC_016947:2380500:241098324109832411492510Mycobacterium intracellulare MOTT-02 chromosome, complete genomeTetR family transcriptional regulator1e-1376.3
NC_009943:940835:943234943234943899666Candidatus Desulfococcus oleovorans Hxd3, complete genometranscriptional regulator, TetR family2e-1375.9
NC_017904:2379387:243216224321622432725564Mycobacterium sp. MOTT36Y chromosome, complete genomeTetR family transcriptional regulator2e-1272.8
NC_014814:1397429:142092614209261421567642Mycobacterium sp. Spyr1 chromosome, complete genometranscriptional regulator, TetR family3e-1271.6
NC_016947:2380500:240918824091882409802615Mycobacterium intracellulare MOTT-02 chromosome, complete genomeTetR family transcriptional regulator7e-1270.5
NC_009077:4810379:481774748177474818382636Mycobacterium sp. JLS, complete genometranscriptional regulator, TetR family9e-1270.1
NC_010397:2063561:206776720677672068351585Mycobacterium abscessus chromosome Chromosome, complete sequencePutative transcriptional regulator2e-1169.3
NC_016948:678939:680116680116680640525Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein3e-1168.6