Pre_GI Gene

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Host: NC_008253 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008253:3161311 Escherichia coli 536, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (536; O6:K15:H31) is a uropathogenic Escherichia coli (UPEC) that was isolated from a patient with acute pyelonephritis (inflammation of the kidney and pelvis). This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
31613113162102792hypothetical proteinBLASTP
31624863162692207putative regulatory proteinQuickGO ontologyBLASTP
31627863163388603hypothetical proteinBLASTP
31634493163763315hypothetical protein
31641483164360213hypothetical protein
31644073164709303hypothetical protein
31650983165310213hypothetical proteinBLASTP
31658313166457627hypothetical proteinBLASTP
31665973167271675hypothetical proteinBLASTP
31675663168438873hypothetical proteinBLASTP
316880831716542847putative autotransporterQuickGO ontologyBLASTP
31717253171958234hypothetical protein YkfFQuickGO ontologyBLASTP
31720493172867819hypothetical proteinBLASTP
31729593173444486hypothetical protein YfjX possible anti-restriction proteinQuickGO ontologyBLASTP
31734603173936477putative radC-like protein YeeSQuickGO ontologyBLASTP
31740053174226222hypothetical protein YeeTQuickGO ontologyBLASTP
31742403174668429hypothetical protein YeeUQuickGO ontologyBLASTP
31747583175135378hypothetical protein YeeVQuickGO ontologyBLASTP
31751323175620489hypothetical proteinBLASTP
31755873175829243hypothetical proteinBLASTP
31759143176756843hypothetical proteinBLASTP
31780803179063984polysialic acid capsule expression protein KpsFQuickGO ontologyBLASTP
317913531802831149capsule polysaccharide export inner-membrane protein KpsEQuickGO ontologyBLASTP
318030731819831677polysialic acid transport protein KpsD precursorQuickGO ontologyBLASTP
318199331827337413-deoxy-manno-octulosonate cytidylyltransferaseQuickGO ontologyBLASTP
318273031841781449capsule polysaccharide export protein KpsCQuickGO ontologyBLASTP
31842163184593378hypothetical proteinBLASTP
31847023185253552hypothetical proteinBLASTP
318540831866581251capsule polysaccharide export protein KpsSQuickGO ontologyBLASTP
318669531888242130capsule export protein KpsCQuickGO ontologyBLASTP
31891783190116939hypothetical protein
31900943190381288hypothetical protein
31904143191052639hypothetical proteinBLASTP
31910493192008960hypothetical protein
31920053192994990hypothetical protein
31929913193881891putative glycosyltransferaseQuickGO ontologyBLASTP
31948763195544669polysialic acid transport ATP-binding protein KpsTQuickGO ontologyBLASTP
31955413196317777polysialic acid transport protein KpsMQuickGO ontologyBLASTP
31973733197909537hypothetical type II secretion protein GspMQuickGO ontologyBLASTP
319791131990801170hypothetical type II secretion proteinQuickGO ontologyBLASTP
31990863200063978hypothetical type II secretion protein GspKQuickGO ontologyBLASTP
32000603200665606hypothetical type II secretion protein GspJQuickGO ontologyBLASTP
32006623201033372hypothetical type II secretion protein GspIQuickGO ontologyBLASTP
32010303201593564hypothetical type II secretion protein GspHQuickGO ontologyBLASTP
32015973202052456hypothetical type II secretion proteinQuickGO ontologyBLASTP
320206932032921224hypothetical type II secretion protein GspFQuickGO ontologyBLASTP
320329232047851494hypothetical type II secretion protein GspEQuickGO ontologyBLASTP
320478532068452061hypothetical type II secretion protein GspDQuickGO ontologyBLASTP
32068753207834960hypothetical type II secretion protein GspCQuickGO ontologyBLASTP
32078523208262411hypothetical lipoproteinQuickGO ontologyBLASTP
32083283209137810putative prepilin peptidaseQuickGO ontologyBLASTP