Pre_GI: BLASTN Hits

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Query: NC_008253:3161311 Escherichia coli 536, complete genome

Start: 3161311, End: 3209137, Length: 47827

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (536; O6:K15:H31) is a uropathogenic Escherichia coli (UPEC) that was isolated from a patient with acute pyelonephritis (inflammation of the kidney and pelvis). This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011750:35840003584000361674032741Escherichia coli IAI39 chromosome, complete genome022290BLASTN svgBLASTP svg
NC_011751:35309543530954356883437881Escherichia coli UMN026 chromosome, complete genome021400BLASTN svgBLASTP svg
NC_008563:33620583362058338959927542Escherichia coli APEC O1, complete genome019210BLASTN svgBLASTP svg
NC_007946:32891513289151331659927449Escherichia coli UTI89, complete genome019090BLASTN svgBLASTP svg
NC_010498:32913443291344332017728834Escherichia coli SMS-3-5, complete genome016210BLASTN svgBLASTP svg
NC_011740:29865142986514300959323080Escherichia fergusonii ATCC 35469, complete genome08919BLASTN svgBLASTP svg
NC_004431:35131473513147354268029534Escherichia coli CFT073, complete genome08514BLASTN svgBLASTP svg
NC_013716:5201097*5201097527659975503Citrobacter rodentium ICC168, complete genome07523BLASTN svgBLASTP svg
NC_007946:1119000*1119000114261923620Escherichia coli UTI89, complete genome07464BLASTN svgBLASTP svg
NC_004431:43191524319152434223723086Escherichia coli CFT073, complete genome05099BLASTN svgBLASTP svg
NC_004431:27986827986832229542428Escherichia coli CFT073, complete genome03921BLASTN svgBLASTP svg
AP010958:36695003669500372827458775Escherichia coli O103:H2 str. 12009 DNA, complete genome03533BLASTN svgBLASTP svg
NC_011750:47757704775770480021124442Escherichia coli IAI39 chromosome, complete genome03433BLASTN svgBLASTP svg
NC_008253:48178644817864486276044897Escherichia coli 536, complete genome03394BLASTN svgBLASTP svg
NC_007946:48759974875997491969643700Escherichia coli UTI89, complete genome03394BLASTN svgBLASTP svg
NC_008253:334467*33446741611981653Escherichia coli 536, complete genome02922BLASTN svgBLASTP svg
NC_015566:40490004049000406909920100Serratia sp. AS12 chromosome, complete genome02755BLASTN svgBLASTP svg
NC_004741:3041294*3041294310468963396Shigella flexneri 2a str. 2457T, complete genome02736BLASTN svgBLASTP svg
NC_004337:3049118*3049118311609966982Shigella flexneri 2a str. 301, complete genome02736BLASTN svgBLASTP svg
NC_004431:11665681166568119813631569Escherichia coli CFT073, complete genome02006BLASTN svgBLASTP svg
NC_008253:28285732828573285250723935Escherichia coli 536, complete genome02006BLASTN svgBLASTP svg
NC_004431:51233255123325514909025766Escherichia coli CFT073, complete genome01988BLASTN svgBLASTP svg
NC_009801:48826844882684490824525562Escherichia coli E24377A, complete genome01980BLASTN svgBLASTP svg
NC_011083:45478254547825460814560321Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,01951BLASTN svgBLASTP svg
NC_008563:47078264707826473072322898Escherichia coli APEC O1, complete genome01685BLASTN svgBLASTP svg
NC_004431:1211000*1211000123322222223Escherichia coli CFT073, complete genome01633BLASTN svgBLASTP svg
NC_004431:3409389*3409389349493685548Escherichia coli CFT073, complete genome01604BLASTN svgBLASTP svg
NC_011750:43900004390000444275952760Escherichia coli IAI39 chromosome, complete genome01552BLASTN svgBLASTP svg
NC_002695:45841774584177463575951583Escherichia coli O157:H7 str. Sakai, complete genome01366BLASTN svgBLASTP svg
NC_002655:46531604653160470328250123Escherichia coli O157:H7 EDL933, complete genome01366BLASTN svgBLASTP svg
NC_013716:1178383*1178383120516726785Citrobacter rodentium ICC168, complete genome01090BLASTN svgBLASTP svg
CP002797:46563274656327468071624390Escherichia coli NA114, complete genome0823BLASTN svgBLASTP svg
NC_010102:997417*997417101802320607Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,2e-144521BLASTN svgBLASTP svg
NC_011149:1987291*1987291203423646946Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-137498BLASTN svgBLASTP svg
NC_011751:34536833453683351238358701Escherichia coli UMN026 chromosome, complete genome2e-119438BLASTN svgBLASTP svg
AP010958:36273553627355365976432410Escherichia coli O103:H2 str. 12009 DNA, complete genome5e-105391BLASTN svgBLASTP svg
NC_012912:3853377*3853377389607042694Dickeya zeae Ech1591, complete genome1e-102383BLASTN svgBLASTP svg
NC_014121:37769023776902380024423343Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete4e-44188BLASTN svgBLASTP svg
NC_020260:88230788230791401031704Cronobacter sakazakii Sp291, complete genome4e-44188BLASTN svgBLASTP svg
NC_011750:3545466*3545466356309917634Escherichia coli IAI39 chromosome, complete genome2e-39172BLASTN svgBLASTP svg
NC_009786:43331433316409920769Escherichia coli E24377A plasmid pETEC_80, complete sequence2e-39172BLASTN svgBLASTP svg
NC_013282:64656964656966558719019Cronobacter turicensis, complete genome1e-37167BLASTN svgBLASTP svg
NC_007384:1320287*1320287134781127525Shigella sonnei Ss046, complete genome5e-37165BLASTN svgBLASTP svg
NC_007384:16500*165004120424705Shigella sonnei Ss046, complete genome5e-37165BLASTN svgBLASTP svg
NC_007384:16968311696831171856121731Shigella sonnei Ss046, complete genome5e-37165BLASTN svgBLASTP svg
NC_007384:37417083741708376309921392Shigella sonnei Ss046, complete genome5e-37165BLASTN svgBLASTP svg
NC_020260:32770073277007330315226146Cronobacter sakazakii Sp291, complete genome3e-35159BLASTN svgBLASTP svg
NC_009778:32876933287693330930421612Enterobacter sakazakii ATCC BAA-894, complete genome3e-35159BLASTN svgBLASTP svg
NC_011149:11106421110642113231521674Salmonella enterica subsp. enterica serovar Agona str. SL483,8e-30141BLASTN svgBLASTP svg
NC_007712:1954808*1954808197959924792Sodalis glossinidius str. 'morsitans', complete genome7e-27131BLASTN svgBLASTP svg
NC_007712:31630003163000318759924600Sodalis glossinidius str. 'morsitans', complete genome3e-26129BLASTN svgBLASTP svg
NC_015061:1481500*1481500150744925950Rahnella sp. Y9602 chromosome, complete genome1e-25127BLASTN svgBLASTP svg
NC_009832:19464011946401197178325383Serratia proteamaculans 568, complete genome7e-24121BLASTN svgBLASTP svg
NC_007712:254000*25400027659922600Sodalis glossinidius str. 'morsitans', complete genome7e-24121BLASTN svgBLASTP svg
NC_020064:3609844*3609844365321743374Serratia marcescens FGI94, complete genome3e-23119BLASTN svgBLASTP svg
NC_007712:26499402649940266759917660Sodalis glossinidius str. 'morsitans', complete genome3e-23119BLASTN svgBLASTP svg
NC_012912:1788308*1788308184662758320Dickeya zeae Ech1591, complete genome1e-22117BLASTN svgBLASTP svg
NC_012912:10536181053618108982736210Dickeya zeae Ech1591, complete genome1e-22117BLASTN svgBLASTP svg
AP010958:52728635272863529459921737Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-18103BLASTN svgBLASTP svg
NC_013592:446092*44609246819222101Dickeya dadantii Ech586, complete genome2e-18103BLASTN svgBLASTP svg
NC_015663:54942554942558284933425Enterobacter aerogenes KCTC 2190 chromosome, complete genome2e-18103BLASTN svgBLASTP svg
NC_018691:24107792410779243591125133Alcanivorax dieselolei B5 chromosome, complete genome7e-18101BLASTN svgBLASTP svg
NC_020260:603796*60379665197748182Cronobacter sakazakii Sp291, complete genome3e-1799.6BLASTN svgBLASTP svg
NC_010488:48868488687267123804Escherichia coli SMS-3-5 plasmid pSMS35_130, complete sequence3e-1799.6BLASTN svgBLASTP svg
NC_007712:3629358*3629358365546826111Sodalis glossinidius str. 'morsitans', complete genome4e-1695.6BLASTN svgBLASTP svg
NC_020181:51305135130513517631045798Enterobacter aerogenes EA1509E, complete genome2e-1593.7BLASTN svgBLASTP svg
NC_015663:113797137971Enterobacter aerogenes KCTC 2190 chromosome, complete genome6e-1591.7BLASTN svgBLASTP svg
NC_015061:366552*36655238559319042Rahnella sp. Y9602 chromosome, complete genome6e-1591.7BLASTN svgBLASTP svg
NC_020260:263528*26352829118227655Cronobacter sakazakii Sp291, complete genome1e-1387.7BLASTN svgBLASTP svg
AC_000091:2747520*2747520280214854629Escherichia coli W3110 DNA, complete genome4e-1385.7BLASTN svgBLASTP svg
NC_000913:2746886*2746886280151454629Escherichia coli K12, complete genome4e-1385.7BLASTN svgBLASTP svg
NC_010473:2839902*2839902288978149880Escherichia coli str. K-12 substr. DH10B, complete genome4e-1385.7BLASTN svgBLASTP svg
NC_010498:301000*30100034338442385Escherichia coli SMS-3-5, complete genome6e-1281.8BLASTN svgBLASTP svg
NC_010634:13423931342393136733024938Yersinia pseudotuberculosis PB1/+, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_015663:18690001869000191219543196Enterobacter aerogenes KCTC 2190 chromosome, complete genome9e-1177.8BLASTN svgBLASTP svg
NC_013421:15051761505176152341618241Pectobacterium wasabiae WPP163, complete genome9e-1177.8BLASTN svgBLASTP svg
NC_013282:3719500*3719500373815318654Cronobacter turicensis, complete genome9e-1177.8BLASTN svgBLASTP svg
NC_012912:4012112*4012112403907126960Dickeya zeae Ech1591, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_014500:56486456486459190627043Dickeya dadantii 3937 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_007414:56508565089199935492Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequence1e-0973.8BLASTN svgBLASTP svg
NC_003198:33131433131435709925786Salmonella enterica subsp. enterica serovar Typhi str. CT18,6e-0971.9BLASTN svgBLASTP svg
NC_004631:26159082615908263824422337Salmonella enterica subsp. enterica serovar Typhi Ty2, complete6e-0971.9BLASTN svgBLASTP svg
NC_006511:25405002540500256809927600Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC6e-0971.9BLASTN svgBLASTP svg
NC_009778:259241*25924128824029000Enterobacter sakazakii ATCC BAA-894, complete genome6e-0971.9BLASTN svgBLASTP svg
NC_011083:33891033891036299924090Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,6e-0971.9BLASTN svgBLASTP svg
NC_021066:46029246029251915858867Raoultella ornithinolytica B6, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_012917:32411963241196329451553320Pectobacterium carotovorum subsp. carotovorum PC1, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_005126:34965834965840029550638Photorhabdus luminescens subsp. laumondii TTO1, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_005126:43337674333767439509961333Photorhabdus luminescens subsp. laumondii TTO1, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_005126:4824500*4824500485430329804Photorhabdus luminescens subsp. laumondii TTO1, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_009648:3720000*3720000374226022261Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_009790:42112421126914727036Escherichia coli E24377A plasmid pETEC_74, complete sequence9e-0867.9BLASTN svgBLASTP svg
NC_009801:2898426*2898426294876250337Escherichia coli E24377A, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_009801:995396995396101946824073Escherichia coli E24377A, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_020064:3998715*3998715409080492090Serratia marcescens FGI94, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_005126:5188976*5188976521454825573Photorhabdus luminescens subsp. laumondii TTO1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_009801:21591232159123218213823016Escherichia coli E24377A, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_011071:35444503544450356909924650Stenotrophomonas maltophilia R551-3, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015663:49500004950000501991769918Enterobacter aerogenes KCTC 2190 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_020181:36050036050040550545006Enterobacter aerogenes EA1509E, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_021066:3703725*3703725372609922375Raoultella ornithinolytica B6, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_008702:25205002520500255173231233Azoarcus sp. BH72, complete genome6e-0661.9BLASTN svgBLASTP svg