Pre_GI Gene

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Host: NC_008146 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008146:1577604 Mycobacterium sp. MCS, complete genome

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
15776041578440837alphabeta hydrolase foldQuickGO ontologyBLASTP
15785811578922342Heavy metal transportdetoxification proteinQuickGO ontologyBLASTP
15789191579875957hypothetical proteinBLASTP
157991015821922283Heavy metal translocating P-type ATPaseQuickGO ontologyBLASTP
15822111582486276YHSQuickGO ontologyBLASTP
15825651582894330protein of unknown function DUF156QuickGO ontologyBLASTP
15830841583374291hypothetical proteinBLASTP
158345015844871038Integrase catalytic regionQuickGO ontologyBLASTP
15850451585791747hypothetical proteinBLASTP
15859051586507603ABC transporter relatedQuickGO ontologyBLASTP
158650415880061503putative ABC transporter membrane proteinQuickGO ontologyBLASTP
15880031588410408hypothetical proteinBLASTP
158873915910452307Heavy metal translocating P-type ATPaseQuickGO ontologyBLASTP
15910421591554513pyridoxamine 5-phosphate oxidase-related FMN-binding proteinQuickGO ontologyBLASTP
15919621592231270hypothetical proteinBLASTP
15922771593131855hypothetical proteinBLASTP
159331515945621248transposase mutator typeQuickGO ontologyBLASTP
159475915973352577hypothetical proteinBLASTP
15973321598330999AAA ATPase central regionQuickGO ontologyBLASTP
15984891599430942DSBA oxidoreductaseQuickGO ontologyBLASTP
159957316017442172Heavy metal translocating P-type ATPaseQuickGO ontologyBLASTP
16017661602104339hypothetical proteinBLASTP
16022981602906609hypothetical proteinBLASTP
16032811604132852Toll-Interleukin receptorQuickGO ontologyBLASTP
16051061606014909transcriptional regulator LysR familyQuickGO ontologyBLASTP
16062051606756552short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP