Pre_GI: BLASTP Hits

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Query: NC_008146:1577604:1582565 Mycobacterium sp. MCS, complete genome

Start: 1582565, End: 1582894, Length: 330

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:1557711:158687315868731587202330Mycobacterium sp. KMS, complete genomeprotein of unknown function DUF1561e-57221
NC_009077:4671417:469585746958574696186330Mycobacterium sp. JLS, complete genomeprotein of unknown function DUF1563e-50196
NC_009338:955195:957847957847958176330Mycobacterium gilvum PYR-GCK chromosome, complete genomehypothetical protein1e-44178
NC_014814:5422972:543961654396165439945330Mycobacterium sp. Spyr1 chromosome, complete genomehypothetical protein2e-43174
NC_013441:2761459:277580727758072776136330Gordonia bronchialis DSM 43247, complete genomeprotein of unknown function DUF1568e-35145
NC_013441:4539035:454119445411944541541348Gordonia bronchialis DSM 43247, complete genomeprotein of unknown function DUF1564e-33139
NC_013169:1058463:108235810823581082663306Kytococcus sedentarius DSM 20547, complete genomehypothetical protein3e-31134
NC_004369:437594:439624439624439950327Corynebacterium efficiens YS-314, complete genomehypothetical protein7e-30129
NC_017955:1584269:159512415951241595429306Modestobacter marinus, complete genomeCopper-sensing transcriptional repressor csoR7e-30129
NC_014151:4021394:405623040562304056511282Cellulomonas flavigena DSM 20109 chromosome, complete genomeprotein of unknown function DUF1564e-27120
NC_008578:1827605:185616018561601856441282Acidothermus cellulolyticus 11B, complete genomeprotein of unknown function DUF1562e-26117
NC_002944:4163490:418114341811434181457315Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein4e-26116
NC_013947:6221877:624207762420776242373297Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehypothetical protein2e-25114
NC_013715:98000:103929103929104354426Rothia mucilaginosa DY-18, complete genomehypothetical protein7e-24109
NC_017219:275476:297673297673297954282Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein7e-2095.9
NC_013205:1123280:116707211670721167368297Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,protein of unknown function DUF1564e-1580.1
NC_016593:981500:994622994622994933312Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein2e-1478.2
NC_007759:2179000:220662622066262207021396Syntrophus aciditrophicus SB, complete genomehypothetical cytosolic protein5e-1476.6
NC_014377:1298806:131473113147311315018288Thermosediminibacter oceani DSM 16646 chromosome, complete genomeprotein of unknown function DUF1563e-1373.6
NC_014388:55903:600956009560430336Butyrivibrio proteoclasticus B316 chromosome 2, complete genomehypothetical protein8e-1372.4
NC_007644:1694879:171087017108701711163294Moorella thermoacetica ATCC 39073, complete genomeProtein of unknown function DUF1565e-1166.2
NC_018515:989616:992856992856993137282Desulfosporosinus meridiei DSM 13257 chromosome, complete genomehypothetical protein7e-1165.9
NC_011830:3786173:380770038077003807978279Desulfitobacterium hafniense DCB-2, complete genomeprotein of unknown function DUF1567e-1165.9
NC_016047:2658000:267363226736322673964333Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completehypothetical protein7e-1165.9
NC_017068:1852708:185528618552861855594309Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein7e-1062.8
NC_015850:110364:154058154058154327270Acidithiobacillus caldus SM-1 chromosome, complete genomehypothetical protein6e-1062.8
NC_009483:1779601:178029717802971780587291Geobacter uraniireducens Rf4 chromosome, complete genomehypothetical protein1e-0962
NC_007907:5104476:512090551209055121237333Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-0960.1
NC_009253:2315958:234082623408262341158333Desulfotomaculum reducens MI-1 chromosome, complete genomehypothetical protein7e-0959.3
NC_013895:605488:624665624665625111447Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completehypothetical protein3e-0857.4
NC_008261:225425:237945237945238214270Clostridium perfringens ATCC 13124, complete genomehypothetical protein6e-0856.2
NC_003366:255480:268495268495268770276Clostridium perfringens str. 13, complete genomehypothetical protein6e-0856.2
NC_019748:1634954:164888416488841649210327Stanieria cyanosphaera PCC 7437, complete genomeprotein of unknown function DUF1567e-0855.8
NC_021182:4022894:402785140278514028117267Clostridium pasteurianum BC1, complete genomehypothetical protein7e-0855.8
NC_008262:227354:239941239941240210270Clostridium perfringens SM101, complete genomehypothetical protein1e-0755.1
NC_017297:2288000:229584122958412296116276Clostridium botulinum F str. 230613 chromosome, complete genomehypothetical protein1e-0755.1
NC_012658:2295536:230411323041132304388276Clostridium botulinum Ba4 str. 657 chromosome, complete genomehypothetical protein1e-0755.1
NC_009699:2287893:229572922957292296004276Clostridium botulinum F str. Langeland chromosome, complete genomehypothetical protein1e-0755.1
NC_012563:2384500:238999923899992390274276Clostridium botulinum A2 str. Kyoto, complete genomehypothetical protein2e-0754.7
NC_015172:1255956:126606912660691266359291Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeprotein of unknown function DUF1562e-0754.3
NC_007952:3283394:331051533105153310790276Burkholderia xenovorans LB400 chromosome 2, complete sequencehypothetical protein2e-0754.3
NC_009439:2427120:247209224720922472385294Pseudomonas mendocina ymp, complete genomehypothetical protein5e-0753.1
NC_009254:637952:657548657548657814267Burkholderia vietnamiensis G4 chromosome 3, complete sequencehypothetical protein5e-0753.1
NC_009256:1782000:178933617893361789602267Burkholderia vietnamiensis G4 chromosome 1, complete sequencehypothetical protein5e-0753.1
NC_014378:131810:135132135132135404273Acetohalobium arabaticum DSM 5501 chromosome, complete genomeprotein of unknown function DUF1565e-0753.1
NC_021175:964224:983443983443983697255Streptococcus oligofermentans AS 1.3089, complete genomehypothetical protein5e-0753.1
NC_015379:2751342:276752427675242767820297Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein6e-0752.8
NC_015425:1687050:169523516952351695498264Clostridium botulinum BKT015925 chromosome, complete genomehypothetical protein2e-0651.2
NC_019897:4014485:403032240303224030588267Thermobacillus composti KWC4 chromosome, complete genomehypothetical protein2e-0651.2
NC_010552:58294:100997100997101269273Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceprotein of unknown function DUF1563e-0650.8
NC_013929:8474195:849384984938498494139291Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein3e-0650.4