Pre_GI Gene

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Host: NC_008060 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008060:1945597 Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (AU 1054) was isolated from the blood of a patient with CF. This microbe has three chromosomes. Opportunistic pathogen. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
194559719466821086hypothetical proteinBLASTP
194720819500842877inner membrane proteinQuickGO ontologyBLASTP
19501971950523327hypothetical proteinBLASTP
19505341950881348hypothetical proteinBLASTP
19510431951507465hypothetical proteinBLASTP
19519111952198288hypothetical proteinBLASTP
19521951952524330phage transcriptional regulator AlpAQuickGO ontologyBLASTP
19525771953572996hypothetical proteinBLASTP
195363819549511314hypothetical proteinBLASTP
19552971955875579Resolvase-likeQuickGO ontologyBLASTP
19558861956836951hypothetical proteinBLASTP
19574101957820411hypothetical proteinBLASTP
19578981958218321hypothetical proteinBLASTP
19590781959299222hypothetical proteinBLASTP
195938419604361053Phytanoyl-CoA dioxygenaseQuickGO ontologyBLASTP
19607581961534777O-methyltransferase family 3QuickGO ontologyBLASTP
196158119618772974Fe-4S ferredoxin iron-sulfur bindingQuickGO ontologyBLASTP
19618801962188309hypothetical proteinBLASTP
19622011962782582RNA polymerase sigma-24 subunit ECF subfamilyQuickGO ontologyBLASTP
19630851963576492hypothetical proteinBLASTP
19636371964377741short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
19644931965116624transcriptional regulator TetR familyQuickGO ontologyBLASTP
19651431965643501proteinase inhibitor I11 ecotinQuickGO ontologyBLASTP
19657871966113327hypothetical proteinBLASTP
19663111966712402hypothetical proteinBLASTP
19668301967210381hypothetical proteinBLASTP
196739319687601368major facilitator superfamily MFS_1QuickGO ontologyBLASTP
19687951969388594ATPase-likeQuickGO ontologyBLASTP
196938119708021422Alphaalpha-trehalose-phosphate synthaseQuickGO ontologyBLASTP
19709411971165225hypothetical proteinBLASTP
19714001971990591hypothetical proteinBLASTP
19719871972481495hypothetical proteinBLASTP